Evidence map›Paper›PMID 30145665›Full record

ArticleImmunogenetics2018

HLA class I alterations in breast carcinoma are associated with a high frequency of the loss of heterozygosity at chromosomes 6 and 15.

María A Garrido, Teresa Rodriguez, Svitlana Zinchenko, Isabel Maleno, Francisco Ruiz-Cabello, Ángel Concha, Nicolás Olea, Federico Garrido, Natalia Aptsiauri

Abstract read
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 50 citations in OpenAlex.

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  17. The evolving landscape of PCSK9 inhibition in cancer.European journal of pharmacology · 2023
    Review
  18. Emerging phagocytosis checkpoints in cancer immunotherapy.Signal transduction and targeted therapy · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

María A GarridoServicio de Radiología, UGC de Radiología, Hospital Universitario Virgen de las Nieves, Granada, Spain.
Teresa RodriguezServicio de Análisis Clínicos e Inmunología, UGC de Laboratorio Clinico, Hospital Universitario Virgen de las Nieves, Granada, Spain.
Svitlana ZinchenkoServicio de Análisis Clínicos e Inmunología, UGC de Laboratorio Clinico, Hospital Universitario Virgen de las Nieves, Granada, Spain.
Isabel MalenoServicio de Análisis Clínicos e Inmunología, UGC de Laboratorio Clinico, Hospital Universitario Virgen de las Nieves, Granada, Spain.
Francisco Ruiz-CabelloServicio de Análisis Clínicos e Inmunología, UGC de Laboratorio Clinico, Hospital Universitario Virgen de las Nieves, Granada, Spain.
Ángel ConchaServicio de Anatomía Patológica, Hospital Juan Canalejo, A Coruña, Spain.
Nicolás OleaInstituto de Investigación Biosanitaria ibs. Granada, Granada, Spain.
Federico GarridoServicio de Análisis Clínicos e Inmunología, UGC de Laboratorio Clinico, Hospital Universitario Virgen de las Nieves, Granada, Spain. federico.garrido.sspa@juntadeandalucia.es.
Natalia AptsiauriInstituto de Investigación Biosanitaria ibs. Granada, Granada, Spain. naptsiauri@ugr.es.
Hospital Universitario Virgen de las Nieves · ESInstituto de Investigación Biosanitaria de Granada · ESComplejo Hospitalario Universitario de Granada · ESHospital San Juan de la Cruz · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HLA class I (HLA-I) molecules play a crucial role in the presentation of tumor antigenic peptides to CD8+ T cells. Tumor HLA-I loss provides a route of immune escape from T cell-mediated killing. We analyzed HLA-I expression in 98 cryopreserved breast cancer tissues using a broad panel of anti-HLA-I antibodies. Genomic HLA-I typing was performed using DNA obtained from autologous normal breast tissue. Analysis of the loss of heterozygosity (LOH) in the HLA-I region of chromosome 6 (LOH-6) and in the β2-microglobulin (B2M) region of chromosome 15 (LOH-15) was done by microsatellite amplification of DNA isolated from microdissected tumor areas. B2M gene sequencing was done using this DNA form HLA-I-negative tumors. Immunohistological analysis revealed various types of HLA-I alterations in 79 tumors (81%), including total HLA-I loss in 53 cases (54%) and partial loss in 16 samples (14%). In 19 cases (19%), HLA-I expression was positive. Using microsatellite analysis, we detected LOH in 36 cases out of 92 evaluated (39%), including 15 samples with only LOH-6, 14 with LOH-15, and seven tumors with LOH-6 and LOH-15 at the same time. Remarkably, we detected LOH-6 in eight tumors with positive HLA-I immunolabeling. We did not find any B2M mutations in HLA-I-negative breast tumors. In conclusion, LOH at chromosomes 6 and 15 has a high incidence in breast cancer and occurs in tumors with different HLA-I immunophenotypes. This common molecular mechanism of HLA-I alterations may reduce the ability of cytotoxic T lymphocytes  to kill tumor cells and negatively influence the clinical success of cancer immunotherapy.

Indexed as

AdultAgedAged, 80 and overAntigens, Neoplasmbeta 2-MicroglobulinBreast NeoplasmsChromosomes, Human, Pair 15Chromosomes, Human, Pair 6FemaleHistocompatibility Antigens Class IHistocompatibility TestingHumansLoss of HeterozygosityMicrosatellite RepeatsMiddle AgedAntigens, Neoplasmbeta 2-MicroglobulinHistocompatibility Antigens Class IBreast cancerCancer immune escapeHLA class ILoss of heterozygosity

Identifiers

PMID30145665
OpenAlexW2888267383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.