Evidence map›Paper›PMID 30143930›Full record

ArticleFish physiology and biochemistry2019

Comparative skin transcriptome of two Oujiang color common carp (Cyprinus carpio var. color) varieties.

Jinxing Du, Xiaowen Chen, Jun Wang, Honglin Chen, Wucheng Yue, Guoqing Lu, Chenghui Wang

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Fish physiology and biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Jinxing DuKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China.
Xiaowen ChenKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China.
Jun WangKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China.
Honglin ChenKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China.
Wucheng YueKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China.
Guoqing LuDepartment of Biology, University of Nebraska at Omaha, Omaha, NE, 68135, USA.
Chenghui WangKey Laboratory of Genetic Resources for Freshwater Aquaculture and Fisheries, Shanghai Ocean University, Shanghai, China. wangch@shou.edu.cn.

Funding

Guangxi Innovative development Project AA17204095-7Innovation Project of Shanghai Ocean University Graduate Education A1-0209-15-0903-2Leading Agricultural Talents in Shanghai Project D-8004-16-0217National Natural Science Foundation of China 31372521,31772840Shanghai Science and Technology Project 15391900800
6 · The paper itself

Abstract

Body color variation has long been a hot research topic in evolutionary and functional biology. Oujiang color common carp (Cyprinus carpio var. color) is a well-known economical and ornamental fish. Three main types of pigments and four distinct color patterns are typical characters of Oujiang color common carp, which makes it an excellent fish model to study body coloration. In this study, skin transcriptome assembly and comparisons were conducted in two Oujiang color common carp varieties: whole red and whole white. Transcriptome comparison revealed that more differentially expressed energy metabolism genes were upregulated in whole white compared to whole red. The results indicated that energy metabolism genes might be strongly associated with environmental adaption and growth performance and likely affect the red and white color formation in Oujiang color common carp. Our study provided direct guidance for the aquaculture industrials of Oujiang color common carp and presented valuable genetic resources for body color research in fish.

Indexed as

TranscriptomeAnimalsCarpsPigments, BiologicalRNASkinSkin PigmentationPigments, BiologicalRNABody colorEnergy metabolismGrowth performancePigmentation genes

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.