Evidence map›Paper›PMID 30139969›Full record

ArticleTranslational psychiatry2018

Common and differential transcriptional responses to different models of traumatic stress exposure in rats.

Moriah L Jacobson, Lydia A Kim, Robert Patro, Barbara Rosati, David McKinnon

Abstract read
In one paragraph

Article in Translational psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Moriah L JacobsonDepartment of Psychology, Stony Brook University, Stony Brook, NY, 11794, USA.
Lydia A KimDepartment of Neurobiology and Behavior, Stony Brook University, Stony Brook, NY, 11794, USA.
Robert PatroDepartment of Computer Science, Stony Brook University, Stony Brook, NY, 11794, USA.
Barbara RosatiDepartment of Physiology and Biophysics, Stony Brook University, Stony Brook, NY, 11794, USA.
David McKinnonDepartment of Neurobiology and Behavior, Stony Brook University, Stony Brook, NY, 11794, USA. david.mckinnon@stonybrook.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effect of six different traumatic stress protocols on the transcriptome of the rat adrenal gland was examined using RNA sequencing. These protocols included chronic variable stress, chronic shock, social defeat and social isolation. The response of the transcriptome to stress suggested that there are genes that respond in a universal or stress modality-independent manner, as well as genes that respond in a stress modality-specific manner. Using a small number of the genes selected from the modality-independent set of stress-sensitive genes, a sensitive and robust measure of chronic stress exposure was developed. This stress-sensitive gene expression (SSGE) index could detect chronic traumatic stress exposure in a wide range of different stress models in a manner that was relatively independent of the modality of stress exposure and that paralleled the intensity of stress exposure in a dose-dependent manner. This measure could reliably distinguish control and stressed individuals in the case of animals exposed to the most intense stress protocols. The response of a subset of the modality-specific genes could also distinguish some types of stress exposure, based solely on changes in the pattern of gene expression. The results suggest that it is possible to develop diagnostic measures of traumatic stress exposure based solely on changes in the level of expression of a relatively small number of genes.

Indexed as

TranscriptomeAnimalsBehavior, AnimalBehavior Rating ScaleDisease Models, AnimalMaleRatsRats, Sprague-DawleySequence Analysis, RNAStress, Psychological

Identifiers

PMID30139969
PMCPMC6107654

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.