Evidence map›Paper›PMID 30139934›Full record

ArticleNature communications2018

CTD-dependent and -independent mechanisms govern co-transcriptional capping of Pol II transcripts.

Melvin Noe Gonzalez, Shigeo Sato, Chieri Tomomori-Sato, Joan W Conaway, Ronald C Conaway

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Targeting CDKs in the RNAPII transcription cycle.Nature reviews. Drug discovery · 2026
    Review
  2. Article
  3. Direct roles of long non-coding RNAs in transcription activation.Nature structural & molecular biology · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Structural advances in transcription elongation.Current opinion in structural biology · 2022
    Review
  9. Review
  10. Targeting transcription cycles in cancer.Nature reviews. Cancer · 2022
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. The capping enzyme facilitates promoter escape and assembly of a follow-on preinitiation complex for reinitiation.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Melvin Noe GonzalezStowers Institute for Medical Research, 1000 E 50 th Street, Kansas City, MO, 64110, USA.ORCID http://orcid.org/0000-0003-0943-3278
Shigeo SatoStowers Institute for Medical Research, 1000 E 50 th Street, Kansas City, MO, 64110, USA.
Chieri Tomomori-SatoStowers Institute for Medical Research, 1000 E 50 th Street, Kansas City, MO, 64110, USA.ORCID http://orcid.org/0000-0002-2543-293X
Joan W ConawayStowers Institute for Medical Research, 1000 E 50 th Street, Kansas City, MO, 64110, USA.ORCID http://orcid.org/0000-0002-2786-0663
Ronald C ConawayStowers Institute for Medical Research, 1000 E 50 th Street, Kansas City, MO, 64110, USA. rcc@stowers.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Co-transcriptional capping of RNA polymerase II (Pol II) transcripts by capping enzyme proceeds orders of magnitude more efficiently than capping of free RNA. Previous studies brought to light a role for the phosphorylated Pol II carboxyl-terminal domain (CTD) in activation of co-transcriptional capping; however, CTD phosphorylation alone could not account for the observed magnitude of activation. Here, we exploit a defined Pol II transcription system that supports both CTD phosphorylation and robust activation of capping to dissect the mechanism of co-transcriptional capping. Taken together, our findings identify a CTD-independent, but Pol II-mediated, mechanism that functions in parallel with CTD-dependent processes to ensure optimal capping, and they support a "tethering" model for the mechanism of activation.

Indexed as

Transcription, GeneticBase SequenceCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesHumansModels, BiologicalPhosphorylationProtein DomainsRNA CapsRNA, MessengerRNA Polymerase IISpecies SpecificityStructure-Activity RelationshipTranscription Factor TFIIHCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesRNA CapsRNA, MessengerRNA Polymerase IITranscription Factor TFIIH

Identifiers

PMID30139934
PMCPMC6107522

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.