Evidence map›Paper›PMID 30135567›Full record

ArticleScientific reports2018

KLF6 and STAT3 co-occupy regulatory DNA and functionally synergize to promote axon growth in CNS neurons.

Zimei Wang, Vatsal Mehra, Matthew T Simpson, Brian Maunze, Advaita Chakraborty, Lyndsey Holan, Erik Eastwood, Murray G Blackmore, Ishwariya Venkatesh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 57 citations in OpenAlex.

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  10. Regulation of axonal regeneration after mammalian spinal cord injury.Nature reviews. Molecular cell biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zimei WangDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Vatsal MehraDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Matthew T SimpsonDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Brian MaunzeDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Advaita ChakrabortyDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Lyndsey HolanDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Erik EastwoodDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA.
Murray G BlackmoreDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA. murray.blackmore@marquette.edu.
Ishwariya VenkateshDepartment of Biomedical Sciences, Marquette University, 53201, Milwaukee, USA. ishwariya.venkatesh@marquette.edu.
Marquette University · US

Funding

Functional Testing of KLF7 in Spinal Cord Injury: An Optogenetic ApproachR01NS083983 · NINDS · MARQUETTE UNIVERSITY · PI BLACKMORE, MURRAY G · 2013 to 2023
$3.5M
Novel Gene Targets at the Intersection of Axon Regeneration and Cancer BiologyR21NS093278 · NINDS · MARQUETTE UNIVERSITY · PI BLACKMORE, MURRAY G · 2016 to 2017
$415k
Craig H. Neilsen Foundation Project Number 385379NINDS NIH HHS R01 NS083983NINDS NIH HHS R21 NS093278U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) NS083983U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) NS093278
6 · The paper itself

Abstract

The failure of axon regeneration in the CNS limits recovery from damage and disease. Members of the KLF family of transcription factors can exert both positive and negative effects on axon regeneration, but the underlying mechanisms are unclear. Here we show that forced expression of KLF6 promotes axon regeneration by corticospinal tract neurons in the injured spinal cord. RNA sequencing identified 454 genes whose expression changed upon forced KLF6 expression in vitro, including sub-networks that were highly enriched for functions relevant to axon extension including cytoskeleton remodeling, lipid synthesis, and bioenergetics. In addition, promoter analysis predicted a functional interaction between KLF6 and a second transcription factor, STAT3, and genome-wide footprinting using ATAC-Seq data confirmed frequent co-occupancy. Co-expression of the two factors yielded a synergistic elevation of neurite growth in vitro. These data clarify the transcriptional control of axon growth and point the way toward novel interventions to promote CNS regeneration.

Indexed as

AnimalsAxonsDNAFemaleGene Expression RegulationGene Regulatory NetworksKruppel-Like Factor 6MiceMice, Inbred C57BLPyramidal TractsRegenerationSpinal InjuriesSTAT3 Transcription FactorTranscription, GeneticDNAKlf6 protein, mouseKruppel-Like Factor 6STAT3 Transcription Factor

Identifiers

PMID30135567
PMCPMC6105645
OpenAlexW2952453603

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.