Evidence map›Paper›PMID 30135545›Full record

ArticleJournal of human genetics2018

Admixture mapping and fine-mapping of type 2 diabetes susceptibility loci in African American women.

José M Uribe-Salazar, Julie R Palmer, Stephen A Haddad, Lynn Rosenberg, Edward A Ruiz-Narváez

Abstract read
In one paragraph

Article in Journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. MAP kinase phosphatases in metabolic diseases.Trends in endocrinology and metabolism: TEM · 2026
    Review
  2. Article
  3. Article
  4. The Impact of Ancestry on Genome-Wide Association Studies.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. The Role ofDiabetes · 2021
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

José M Uribe-SalazarEscuela de Biología, Universidad de Costa Rica, San Pedro, Costa Rica.ORCID http://orcid.org/0000-0003-4875-818X
Julie R PalmerSlone Epidemiology Center at Boston University, Boston, MA, USA.
Stephen A HaddadSlone Epidemiology Center at Boston University, Boston, MA, USA.
Lynn RosenbergSlone Epidemiology Center at Boston University, Boston, MA, USA.
Edward A Ruiz-NarváezDepartment of Nutritional Sciences, University of Michigan School of Public Health, Ann Arbor, MI, USA. eruiznar@umich.edu.
Boston University · USUniversidad de Costa Rica · CRUniversity of Michigan · US

Funding

A Follow-up Study for Causes of Cancer in Black WomenU01CA164974 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Kimberly A. Bertrand, Yvette C Cozier · 2017 to 2026
$24.0M
FOLLOW-UP STUDY FOR CAUSES OF ILLNESS IN BLACK WOMENR01CA058420 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ROSENBERG, LYNN · 1999 to 2013
$20.7M
A Follow-up Study for Causes of Cancer in Black WomenUM1CA164974 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ROSENBERG, LYNN · 2012 to 2017
$13.7M
Gene Polymorphisms in Relation to Cancer in Black WomenR01CA098663 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI PALMER, JULIE R · 2003 to 2012
$5.3M
Weight gain, type 2 diabetes, and factors that affect neuroendocrine functionR01MD007015 · NIMHD · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ROSENBERG, LYNN · 2012 to 2016
$1.4M
NCI NIH HHS R01 CA058420NCI NIH HHS R01 CA098663NCI NIH HHS U01 CA164974NCI NIH HHS UM1 CA164974NIMHD NIH HHS R01 MD007015U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA058420U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA098663U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) UM1CA164974
6 · The paper itself

Abstract

African American women are disproportionately affected by type 2 diabetes. Genetic factors may explain part of the excess risk. More than 100 genetic variants have been associated with risk of type 2 diabetes, but most studies have been conducted in white populations. Two genome-wide association studies (GWAS) in African Americans have identified three novel genetic variants only. We conducted admixture mapping using 2918 ancestral informative markers in 2632 cases of type 2 diabetes, and 2596 controls nested in the ongoing Black Women's Health Study cohort, with the goal of identifying genomic loci with local African ancestry associated with type 2 diabetes. In addition, we performed replication analysis of 71 previously identified index SNPs, and fine-mapped those genetic loci to identify better or new genetic variants associated with type 2 diabetes in African Americans. We found that individual African ancestry was associated with higher risk of type 2 diabetes. In addition, we identified two genomic regions, 3q26 and 12q23, with excess of African ancestry associated with higher risk of type 2 diabetes. Lastly, we replicated 8 out of 71 index SNPs from previous GWAS, including, for the first time in African Americans, the X-linked rs5945326 SNP near the DUSP9 gene. In addition, our fine-mapping efforts suggest independent signals at five loci. Our detailed analysis identified two genomic regions associated with risk of type 2 diabetes, and showed that many genetic risk variants are shared across ancestries.

Indexed as

Chromosome MappingGenetic LociGenetic Predisposition to DiseasePolymorphism, Single NucleotideAdultAgedBlack or African AmericanChromosomes, Human, Pair 12Chromosomes, Human, Pair 3Diabetes Mellitus, Type 2Dual-Specificity PhosphatasesFemaleGenome-Wide Association StudyHumansMiddle AgedMitogen-Activated Protein Kinase PhosphatasesDual-Specificity PhosphatasesDUSP9 protein, humanMitogen-Activated Protein Kinase Phosphatases

Identifiers

PMID30135545
PMCPMC6202164
OpenAlexW2888341930

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.