Evidence map›Paper›PMID 30135240›Full record

ArticleJournal of the American Society of Nephrology : JASN2018

Prevalence Estimates of Polycystic Kidney and Liver Disease by Population Sequencing.

Matthew B Lanktree, Amirreza Haghighi, Elsa Guiard, Ioan-Andrei Iliuta, Xuewen Song, Peter C Harris, Andrew D Paterson, York Pei

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 166 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
166citing papers in PubMed, 5 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

166 citing papers in PubMed, 5 syntheses or guidelines pooled it, 299 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Guideline
  6. Trial
  7. Metformin Therapy in Autosomal Dominant Polycystic Kidney Disease: A Feasibility Study.American journal of kidney diseases : the official journal of the National Kidney Foundation · 2022
    Trial
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Combination siRNA delivery as a therapeutic strategy for ADPKD.bioRxiv : the preprint server for biology · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Typical and atypical ADPKD: predicted pathogenic genetic variants and population frequencies.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2026
    Article
  19. Article
  20. Article

106 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Matthew B LanktreeDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-5750-6286
Amirreza HaghighiDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada.
Elsa GuiardDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada.
Ioan-Andrei IliutaDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada.
Xuewen SongDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada.
Peter C HarrisDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0002-5304-6593
Andrew D PatersonProgram in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, Ontario, Canada; and.ORCID 0000-0002-9169-118X
York PeiDivision of Nephrology, University Health Network, University of Toronto, Toronto, Ontario, Canada; york.pei@uhn.ca.ORCID 0000-0001-7858-1093
University Health Network · CAMayo Clinic · USUniversity of Toronto · CA

Funding

Pilot and FeasibilityP30DK090728 · NIDDK · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2010 to 2019
$11.8M
Transgenic and Knockout Models of ADPKDR01DK059597 · NIDDK · MAYO CLINIC ROCHESTER · PI Peter C. Harris · 2002 to 2026
$9.5M
NIDDK NIH HHS P30 DK090728NIDDK NIH HHS R01 DK059597
6 · The paper itself

Abstract

backgroundEstimating the prevalence of autosomal dominant polycystic kidney disease (ADPKD) is challenging because of age-dependent penetrance and incomplete clinical ascertainment. Early studies estimated the lifetime risk of ADPKD to be about one per 1000 in the general population, whereas recent epidemiologic studies report a point prevalence of three to five cases per 10,000 in the general population.

methodsTo measure the frequency of high-confidence mutations presumed to be causative in ADPKD and autosomal dominant polycystic liver disease (ADPLD) and estimate lifetime ADPKD prevalence, we used two large, population sequencing databases, gnomAD (15,496 whole-genome sequences; 123,136 exome sequences) and BRAVO (62,784 whole-genome sequences). We used stringent criteria for defining rare variants in genes involved in ADPKD (

resultsIdentification of high-confidence pathogenic mutations in whole-genome sequencing provided a lower boundary for lifetime ADPKD prevalence of 9.3 cases per 10,000 sequenced. Estimates from whole-genome and exome data were similar. Truncating mutations in ADPLD genes and genes of potential relevance as cyst modifiers were found in 20.2 cases and 103.9 cases per 10,000 sequenced, respectively.

conclusionsPopulation whole-genome sequencing suggests a higher than expected prevalence of ADPKD-associated mutations. Loss-of-function mutations in ADPLD genes are also more common than expected, suggesting the possibility of unrecognized cases and incomplete penetrance. Substantial rare variation exists in genes with potential for phenotype modification in ADPKD.

Indexed as

Computational BiologyCystsDatabases, GeneticExome SequencingFemaleGenes, ModifierGenetic VariationHumansLiver DiseasesMaleMutationPolycystic Kidney, Autosomal DominantPrevalenceRisk FactorsTRPP Cation ChannelsWhole Genome SequencingTRPP Cation ChannelsADPKDdiseasegenetic renalhuman geneticsliver cystspolycystic kidney disease

Identifiers

PMID30135240
PMCPMC6171271
OpenAlexW2888346415

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.