Evidence map›Paper›PMID 30134290›Full record

ArticleAIDS (London, England)2018

HIV-1 second-line failure and drug resistance at high-level and low-level viremia in Western Kenya.

Rami Kantor, Allison DeLong, Leeann Schreier, Marissa Reitsma, Emanuel Kemboi, Millicent Orido, Salome Obonge, Robert Boinett, Mary Rono, Wilfred Emonyi and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in AIDS (London, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 3 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 3 syntheses or guidelines pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Rami KantorDivision of Infectious Diseases, Alpert Medical School.
Allison DeLongCenter for Statistical Sciences, Brown University, Providence, Rhode Island, USA.
Leeann SchreierDivision of Infectious Diseases, Alpert Medical School.
Marissa ReitsmaDivision of Infectious Diseases, Alpert Medical School.
Emanuel KemboiAcademic Model Providing Access to Healthcare (AMPATH).
Millicent OridoAcademic Model Providing Access to Healthcare (AMPATH).
Salome ObongeAcademic Model Providing Access to Healthcare (AMPATH).
Robert BoinettAcademic Model Providing Access to Healthcare (AMPATH).
Mary RonoAcademic Model Providing Access to Healthcare (AMPATH).
Wilfred EmonyiAcademic Model Providing Access to Healthcare (AMPATH).
Katie BrooksDivision of Infectious Diseases, Alpert Medical School.
Mia CoetzerDivision of Infectious Diseases, Alpert Medical School.
Nathan BuzibaAcademic Model Providing Access to Healthcare (AMPATH).
Joseph HoganCenter for Statistical Sciences, Brown University, Providence, Rhode Island, USA.
Lameck DieroAcademic Model Providing Access to Healthcare (AMPATH).
AMPATH · KEWarren Alpert Foundation · USBrown University · USMiriam Hospital · USMoi University · KE

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH · 1998 to 2026
$51.7M
Optimizing HIV Treatment Monitoring under Resource ConstraintsR01AI108441 · NIAID · BROWN UNIVERSITY · PI HOGAN, JOSEPH W, KANTOR, RAMI · 2015 to 2019
$3.5M
NIAID NIH HHS P30 AI042853NIAID NIH HHS R01 AI108441
6 · The paper itself

Abstract

objectiveCharacterize failure and resistance above and below guidelines-recommended 1000 copies/ml virologic threshold, upon second-line failure.

designCross-sectional study.

methodsKenyan adults on lopinavir/ritonavir-based second-line were enrolled at AMPATH (Academic Model Providing Access to Healthcare). Charts were reviewed for demographic/clinical characteristics and CD4/viral load were obtained. Participants with detectable viral load had a second visit and pol genotyping was attempted in both visits. Accumulated resistance was defined as mutations in the second, not the first visit. Low-level viremia (LLV) was detectable viral load less than 1000 copies/ml. Failure and resistance associations were evaluated using logistic and Poisson regression, Fisher Exact and t-tests.

resultsOf 394 participants (median age 42, 60% women, median 1.9 years on second-line) 48% had detectable viral load; 21% had viral load more than 1000 copies/ml, associated with younger age, tuberculosis treatment, shorter time on second-line, lower CD4count/percentage, longer first-line treatment interruption and pregnancy. In 105 sequences from the first visit (35 with LLV), 79% had resistance (57% dual-class, 7% triple-class; 46% with intermediate-to-high-level resistance to ≥1 future drug option). LLV was associated with more overall and NRTI-associated mutations and with predicted resistance to more next-regimen drugs. In 48 second-visit sequences (after median 55 days; IQR 28-33), 40% accumulated resistance and LLV was associated with more mutation accumulation.

conclusionHigh resistance upon second-line failure exists at levels above and below guideline-recommended virologic-failure threshold, impacting future treatment options. Optimization of care should include increased viral load monitoring, resistance testing and third-line ART access, and consideration of lowering the virologic failure threshold, though this demands further investigation.

Indexed as

Drug Resistance, ViralAdultAnti-HIV AgentsCD4 Lymphocyte CountCross-Sectional StudiesFemaleGenotypeHIV-1HIV InfectionsHumansKenyaLopinavirMaleMiddle Agedpol Gene Products, Human Immunodeficiency VirusRitonavirAnti-HIV AgentsLopinavirpol Gene Products, Human Immunodeficiency VirusRitonavir

Identifiers

PMID30134290
PMCPMC6984814
OpenAlexW2888515292

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.