Evidence map›Paper›PMID 30133529›Full record

ArticlePloS one2018

Optimization of protein extraction and two-dimensional gel electrophoresis profiles for the identification of Cordyceps sinensis and other similar species.

Roy Chi Ho Chan, Steven Sai Wo Lam, Fiona Long Yan Fong, Dominic Tak Wah Chan, Fred Wang Fat Lee, Eric Tung Po Sze

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Roy Chi Ho ChanSchool of Science and Technology, The Open University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.
Steven Sai Wo LamSchool of Science and Technology, The Open University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.
Fiona Long Yan FongSchool of Science and Technology, The Open University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.
Dominic Tak Wah ChanDepartment of Chemistry, The Chinese University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.
Fred Wang Fat LeeSchool of Science and Technology, The Open University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.
Eric Tung Po SzeSchool of Science and Technology, The Open University of Hong Kong, Hong Kong Special Administrative Region, the People's Republic of China.ORCID 0000-0001-6197-0893

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Given that Chinese materia medica (CMM) is expensive and rare, people take tremendous risk to adulterate and falsify Cordyceps sinensis with counterfeit species with similar morphological features. It is thus essential to develop new methods to identify the authenticity of Cordyceps sinensis. It is hypothesized in this study that Cordyceps sinensis possesses certain protein biomarkers distinct from its counterfeits, which can be identified by proteomic technologies for authentication purposes. This is the first study that aims to optimize the conditions for extracting proteins from Cordyceps sinensis, a hybrid of fungal-animal CMM, and to compare the two-dimensional gel electrophoresis (2-DE) profiles between different Cordyceps species. Two different protein extraction buffer systems, namely, phenol/sodium dodecyl sulfate (SDS) buffer or lysis buffer, were evaluated, where the preparation using lysis buffer yielded better protein content. The results also showed that extraction with lysis buffer without pre- or post-washing of samples was the most effective protocol, with over 220% of protein yield and 819 protein spots detected on a 2-DE gel. Moreover, the results demonstrated that Cordyceps sinensis possesses protein biomarkers distinct from its counterfeits, and these biomarkers are not source- or origin-dependent, strongly supporting the feasibility of using identified biomarkers as indicators for authentication of Cordyceps species. The findings of this study warrant further investigations on the structural identification of protein biomarkers of Cordyceps species.

Indexed as

BiomarkersCordycepsDrug ContaminationElectrophoresis, Gel, Two-DimensionalFungal ProteinsMedicine, Chinese TraditionalProteomicsBiomarkersFungal Proteins

Identifiers

PMID30133529
PMCPMC6105017

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.