Evidence map›Paper›PMID 30133019›Full record

ArticleJournal of cellular biochemistry2018

Z-band and M-band titin splicing and regulation by RNA binding motif 20 in striated muscles.

Zhilong Chen, Rexiati Maimaiti, Chaoqun Zhu, Hanfang Cai, Allysa Stern, Paul Mozdziak, Ying Ge, Stephen P Ford, Peter W Nathanielsz, Wei Guo

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Contributions of Titin and Collagen to Passive Stress in Muscles fromInternational journal of molecular sciences · 2022
    Article
  5. Article
  6. Angiotensin II Influences Pre-mRNA Splicing Regulation by EnhancingInternational journal of molecular sciences · 2019
    Article
  7. Dysregulation of Circular RNAs in Myotonic Dystrophy Type 1.International journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhilong ChenDepartment of Animal Science, College of Animal Science and Technology, Northwest A&F University, Yangling, Shanxi, China.
Rexiati MaimaitiDepartment of Animal Science, University of Wyoming, Laramie, Wyoming.
Chaoqun ZhuDepartment of Animal Science, University of Wyoming, Laramie, Wyoming.
Hanfang CaiDepartment of Animal Science, College of Animal Science and Technology, Northwest A&F University, Yangling, Shanxi, China.
Allysa SternPrestage Department of Poultry Science, North Carolina State University, Raleigh, North Carolina.
Paul MozdziakPrestage Department of Poultry Science, North Carolina State University, Raleigh, North Carolina.
Ying GeDepartment of Cell and Regenerative Biology, Human Proteomics Program, University of Wisconsin, Madison, Wisconsin.
Stephen P FordDepartment of Animal Science, University of Wyoming, Laramie, Wyoming.
Peter W NathanielszDepartment of Animal Science, University of Wyoming, Laramie, Wyoming.
Wei GuoDepartment of Animal Science, University of Wyoming, Laramie, Wyoming.ORCID 0000-0002-9158-8107

Funding

Wyoming INBRE Phase 4- Equipment Supplement for x-ray diffractometer for Center for Advanced Scientific InstrumentationP20GM103432 · NIGMS · UNIVERSITY OF WYOMING · PI Robert Scott Seville · 2012 to 2026
$56.8M
Deciphering Myofilament Modifications in Ischemic CardiomyopathyR01HL109810 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2013 to 2024
$3.5M
Top Down Proteomics Of Myofilaments In Heart FailureR01HL096971 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2011 to 2021
$3.3M
Cortisol regulation of perinatal adipose tissue and sheep neonatal leptin peakR01HD070096 · NICHD · UNIVERSITY OF WYOMING · PI NATHANIELSZ, PETER W. · 2013 to 2017
$1.5M
American Heart Association-American Stroke Association 16BGIA27790136NHLBI NIH HHS R01 HL096971NHLBI NIH HHS R01 HL109810NICHD NIH HHS R01 HD070096NIGMS NIH HHS P20 GM103432
6 · The paper itself

Abstract

Titin (TTN) has multifunctional roles in sarcomere assembly, mechanosignaling transduction, and muscle stiffness. TTN splicing generates variable protein sizes with different functions. Therefore, understanding TTN splicing is important to develop a novel treatment for TTN-based diseases. The I-band TTN splicing regulated by RNA binding motif 20 (RBM20) has been extensively studied. However, the Z- and M-band splicing and regulation remain poorly understood. Herein, we aimed to define the Z- and M-band splicing in striated muscles and determined whether RBM20 regulates the Z- and M-band splicing. We discovered four new Z-band TTN splicing variants, and one of them dominates in mouse, rat, sheep, and human hearts. But only one form can be detected in frog and chicken hearts. In skeletal muscles, three new Z repeats (Zr) were detected, and Zr4 to 6 exclusion dominates in the fast muscles, whereas Zr4 skipping dominates in the slow muscle. No developmental changes were detected in the Z-band. In the M-band, two new variants were discovered with alternative 3' splice site in exon363 (Mex5) and alternative 5' splice site in intron 362. However, only the sheep heart expresses two new variants rather than other species. Skeletal muscles express three M-band variants with altered ratios of Mex5 inclusion to Mex5 exclusion. Finally, we revealed that RBM20 does not regulate the Z- and M-band splicing in the heart, but does in skeletal muscles. Taken together, we characterized the Z- and M-band splicing and provided the first evidence of the role of RBM20 in the Z- and M-band TTN splicing.

Indexed as

Alternative SplicingAnimalsConnectinHumansMiceMuscle, SkeletalMyocardiumProtein KinasesRatsRNA-Binding ProteinsRNA, MessengerRNA Splice SitesSarcomeresSheepConnectinProtein KinasesRBM20 protein, mouseRBM20 protein, ratribonucleic acid binding motif protein 20, humanRNA-Binding ProteinsRNA, MessengerRNA Splice Sitestitin protein, mouseTTN protein, humanTtn protein, ratalternative splicingheart diseaseM-bandRNA binding motif 20 (RBM20)titin (TTN)Z-band

Identifiers

PMID30133019
PMCPMC6218289

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.