Evidence map›Paper›PMID 30131566›Full record

ArticleScientific reports2018

Comprehensive panicle phenotyping reveals that qSrn7/FZP influences higher-order branching.

Yasuko Fujishiro, Ayumi Agata, Sadayuki Ota, Ryota Ishihara, Yasumi Takeda, Takeshi Kunishima, Mayuko Ikeda, Junko Kyozuka, Tokunori Hobo, Hidemi Kitano

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  9. International journal of molecular sciences · 2022
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  12. Article
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  14. Article
  15. Genetic variability of panicle architecture in indigenous rice landraces of Koraput region of Eastern Ghats of India for crop improvement.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  16. Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yasuko FujishiroGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Ayumi AgataGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Sadayuki OtaGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Ryota IshiharaGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Yasumi TakedaGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Takeshi KunishimaGraduate School of Bioagricultural Sciences, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Mayuko IkedaBioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan.
Junko KyozukaGraduate School of Life Sciences, Tohoku University, Katahira, Aoba, Sendai, Miyagi, 980-8577, Japan.
Tokunori HoboBioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan. hobo@agr.nagoya-u.ac.jp.
Hidemi KitanoBioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi, 464-8601, Japan. hdkitano@nuagr1.agr.nagoya-u.ac.jp.

Funding

Ministry of Agriculture, Forestry and Fisheries (Ministry of Agriculture, Forestry and Fisheries of Japan) RBS-2001Ministry of Agriculture, Forestry and Fisheries (Ministry of Agriculture, Forestry and Fisheries of Japan) RBS-2002
6 · The paper itself

Abstract

Rice grain number directly affects crop yield. Identifying alleles that improve panicle architecture would greatly aid the development of high-yield varieties. Here, we show that the quantitative trait locus qSrn7 contains rice FRIZZY PANICLE (FZP), a previously reported gene encoding an ERF transcription factor that promotes floral transition. Reduced expression of FZP in the reproductive stage increases the extent of higher order branching of the panicle, resulting in increased grain number. Genotype analysis of this gene in cultivars from the publicly available National Institute of Agrobiological Sciences (NIAS) Core Collection demonstrated that the extent of higher order branching, especially in the upper panicle, was increased in those cultivars carrying the FZP allele associated with qSrn7. Furthermore, chromosome segment substitution lines resulting from a cross between Koshihikari and Kasalath, the latter of which carries qSrn7/FZP, also showed that upper panicle higher order branching and grain yield were increased by qSrn7/FZP. Our findings indicate that qSrn7/FZP influences panicle branching pattern and is thus useful in the breeding of high-yield rice varieties.

Indexed as

Quantitative Trait LociChromosomes, PlantEvolution, MolecularGene Expression Regulation, PlantOryzaPhenotypePlant ProteinsPlant StructuresReproductionTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID30131566
PMCPMC6104091

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.