Evidence map›Paper›PMID 30131368›Full record

ArticleScience signaling2018

Kinase domain dimerization drives RIPK3-dependent necroptosis.

Saravanan Raju, Daniel M Whalen, Meron Mengistu, Carter Swanson, John G Quinn, Susan S Taylor, Joshua D Webster, Kim Newton, Andrey S Shaw

Abstract read
In one paragraph

Article in Science signaling, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
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  5. Review
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  7. Article
  8. Review
  9. Review
  10. The double-edged functions of necroptosis.Cell death & disease · 2023
    Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. The Killer Pseudokinase Mixed Lineage Kinase Domain-Like Protein (MLKL).Cold Spring Harbor perspectives in biology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Saravanan RajuDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Daniel M WhalenDepartment of Structural Biology, Genentech, South San Francisco, CA 94080, USA.
Meron MengistuDepartment of Research Biology, Genentech, South San Francisco, CA 94080, USA.
Carter SwansonDepartment of Research Biology, Genentech, South San Francisco, CA 94080, USA.
John G QuinnDepartment of Biochemical and Cellular Pharmacology, Genentech, South San Francisco, CA 94080, USA.ORCID 0000-0002-4664-6232
Susan S TaylorDepartments of Chemistry/Biochemistry and Pharmacology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.ORCID 0000-0002-7702-6108
Joshua D WebsterDepartment of Pathology, Genentech, South San Francisco, CA 94080, USA.
Kim NewtonDepartment of Physiological Chemistry, Genentech, South San Francisco, CA 94080, USA.
Andrey S ShawDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA. shaw.andrey@gene.com.ORCID 0000-0001-5685-0272
Washington University in St. Louis · USUniversity of California San Diego · US

Funding

PRINCIPLES IN PULMONARY RESEARCHT32HL007317 · NHLBI · WASHINGTON UNIVERSITY · PI Steven Brody, Michael J Holtzman · 1985 to 2026
$16.1M
Protein Kinase: Primary Structure and cAMP InteractionsR01GM019301 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, SUSAN S. · 1985 to 2013
$3.4M
NHLBI NIH HHS T32 HL007317NIGMS NIH HHS R01 GM019301
6 · The paper itself

Abstract

Necroptosis, an inflammatory form of cell death, is initiated by the activation of receptor-interacting protein kinase 3 (RIPK3), which depends on its interaction with RIPK1. Although catalytically inactive, the RIPK3 mutant D161N still stimulates RIPK1-dependent apoptosis and embryonic lethality in RIPK3 D161N homozygous mice. Whereas the absence of RIPK1 rescues RIPK3 D161N homozygous mice, we report that the absence of RIPK1 leads to embryonic lethality in RIPK3 D161N heterozygous mice. This suggested that the kinase domain of RIPK3 had a noncatalytic function that was enhanced by a conformation induced by the D161N mutation. We found that the RIPK3 kinase domain homodimerized through a surface that is structurally similar to that of the RAF family members. Mutation of residues at the dimer interface impaired dimerization and necroptosis. Kinase domain dimerization stimulated the activation of RIPK3 through cis-autophosphorylation. This noncatalytic, allosteric activity was enhanced by certain kinase-deficient mutants of RIPK3, including D161N. Furthermore, apoptosis induced by certain RIPK3 inhibitors was also dependent on the kinase dimerization interface. Our studies reveal that the RIPK3 kinase domain exhibits catalytically independent function that is important for both RIPK3-dependent necroptosis and apoptosis.

Indexed as

ApoptosisProtein DomainsProtein MultimerizationAnimalsCells, CulturedEmbryo, MammalianFibroblastsHEK293 CellsHumansMice, Inbred C57BLMice, KnockoutMice, TransgenicNecrosisProtein KinasesReceptor-Interacting Protein Serine-Threonine KinasesMLKL protein, mouseProtein KinasesReceptor-Interacting Protein Serine-Threonine KinasesRipk1 protein, mouseRipk3 protein, mouse

Identifiers

PMID30131368
PMCPMC6310155
OpenAlexW2888729548

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.