Evidence map›Paper›PMID 30131329›Full record

ArticleG3 (Bethesda, Md.)2018

Genetic Architecture of Soybean Yield and Agronomic Traits.

Brian W Diers, Jim Specht, Katy Martin Rainey, Perry Cregan, Qijian Song, Vishnu Ramasubramanian, George Graef, Randall Nelson, William Schapaugh, Dechun Wang and 15 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
21.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 136 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 1 country.

Brian W DiersDepartment of Crop Sciences, University of Illinois, Urbana, IL, 61801 bdiers@illinois.edu.
Jim SpechtDepartment of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, 68583.
Katy Martin RaineyDepartment of Agronomy, Purdue University, West Lafayette, IN, 47907.
Perry CreganUSDA-ARS, Beltsville, MD, 20705.
Qijian SongUSDA-ARS, Beltsville, MD, 20705.
Vishnu RamasubramanianDepartment of Agronomy, Iowa State University, Ames, IA, 50011.
George GraefDepartment of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, 68583.
Randall NelsonUSDA-ARS and Department of Crop Sciences, University of Illinois, Urbana, IL, 61801.
William SchapaughDepartment of Agronomy, Kansas State University, Manhattan, KS, 66506.
Dechun WangDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824.
Grover ShannonDivision of Plant Sciences, University of Missouri Delta Center, Portageville, MO, 63873.
Leah McHaleDepartment of Horticulture and Crop Science, The Ohio State University, Columbus, OH, 43210.
Stella K KantartziPlant, Soil, and Agricultural Systems, Southern Illinois University, Carbondale, IL, 62901.
Alencar XavierDow AgroSciences, Indianapolis, IN, 46268.
Rouf MianUSDA-ARS, Raleigh, NC, 27606.
Robert M StuparDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, 55108.ORCID 0000-0002-8836-2924
Jean-Michel MichnoDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, 55108.
Yong-Qiang Charles AnUSDA-ARS Plant Genetic Research Unit at Donald Danforth Plant Science Center, St. Louis, MO, 63132.
Wolfgang GoettelUSDA-ARS Plant Genetic Research Unit at Donald Danforth Plant Science Center, St. Louis, MO, 63132.
Russell WardDepartment of Crop Sciences, University of Illinois, Urbana, IL, 61801.
Carolyn FoxDepartment of Crop Sciences, University of Illinois, Urbana, IL, 61801.
Alexander E LipkaDepartment of Crop Sciences, University of Illinois, Urbana, IL, 61801.ORCID 0000-0003-1571-8528
David HytenDepartment of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, 68583.ORCID 0000-0001-6324-9389
Troy CaryDepartment of Crop Sciences, University of Illinois, Urbana, IL, 61801.
William D BeavisDepartment of Agronomy, Iowa State University, Ames, IA, 50011.
University of Illinois Urbana-Champaign · USUniversity of Nebraska–Lincoln · USDonald Danforth Plant Science Center · USIowa State University · USUniversity of Minnesota · USAgricultural Research Service · USDelta Air Lines (United States) · USKansas State University · USMichigan State University · USPurdue University West Lafayette · USSouthern Illinois University Carbondale · USThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean is the world's leading source of vegetable protein and demand for its seed continues to grow. Breeders have successfully increased soybean yield, but the genetic architecture of yield and key agronomic traits is poorly understood. We developed a 40-mating soybean nested association mapping (NAM) population of 5,600 inbred lines that were characterized by single nucleotide polymorphism (SNP) markers and six agronomic traits in field trials in 22 environments. Analysis of the yield, agronomic, and SNP data revealed 23 significant marker-trait associations for yield, 19 for maturity, 15 for plant height, 17 for plant lodging, and 29 for seed mass. A higher frequency of estimated positive yield alleles was evident from elite founder parents than from exotic founders, although unique desirable alleles from the exotic group were identified, demonstrating the value of expanding the genetic base of US soybean breeding.

Indexed as

Quantitative Trait, HeritableQuantitative Trait LociChromosome MappingChromosomes, PlantGene Expression Regulation, PlantGenetics, PopulationGenome, PlantGlycine maxPhenotypePolymorphism, Single Nucleotidegenetic improvementgenetic mappingMPPMultiparent Advanced Generation Inter-Cross (MAGIC)multiparental populationssoybeanyield

Identifiers

PMID30131329
PMCPMC6169381
OpenAlexW2892244280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.