Evidence map›Paper›PMID 30128746›Full record

ReviewCurrent genetics2019

Dissecting mRNA decay and translation inhibition during iron deficiency.

Lucía Ramos-Alonso, Antonia María Romero, Julio Polaina, Sergi Puig, María Teresa Martínez-Pastor

Open access · greenAbstract readReview
PubMed Publisher
In one paragraph

Review in Current genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Iron Regulatory Mechanisms inFrontiers in microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Lucía Ramos-AlonsoDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), C/ Agustín Escardino 7, Paterna, 46980, Valencia, Spain.ORCID http://orcid.org/0000-0002-1828-4115
Antonia María RomeroDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), C/ Agustín Escardino 7, Paterna, 46980, Valencia, Spain.ORCID http://orcid.org/0000-0002-2727-279X
Julio PolainaDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), C/ Agustín Escardino 7, Paterna, 46980, Valencia, Spain.ORCID http://orcid.org/0000-0001-9912-0640
Sergi PuigDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), C/ Agustín Escardino 7, Paterna, 46980, Valencia, Spain. spuig@iata.csic.es.ORCID http://orcid.org/0000-0002-1856-490X
María Teresa Martínez-PastorDepartamento de Bioquímica y Biología Molecular, Universitat de València, Ave. Doctor Moliner 50, Burjassot, 46100, Valencia, Spain. maria.teresa.martinez@uv.es.ORCID http://orcid.org/0000-0002-4128-958X
Consejo Superior de Investigaciones Científicas · ESUniversitat de València · ES

Funding

Generalitat Valenciana AICO/2015/004Ministerio de Economía, Industria y Competitividad, Gobierno de España BFU2015-71978-REDTMinisterio de Economía, Industria y Competitividad, Gobierno de España BIO2017-87828-C2-1-P
6 · The paper itself

Abstract

Iron participates as a vital cofactor in multiple metabolic pathways. Despite its abundance, iron bioavailability is highly restricted in aerobic and alkaline environments. Therefore, living organisms have evolved multiple adaptive mechanisms to respond to iron scarcity. These strategies include a global remodeling of iron metabolism directed to optimize iron utilization. In the baker's yeast Saccharomyces cerevisiae, this metabolic reorganization is accomplished to a large extent by an mRNA-binding protein called Cth2. Yeast Cth2 belongs to a conserved family of tandem zinc finger containing proteins that specifically bind to transcripts with AU-rich elements and promote their turnover. A recent study has revealed that Cth2 also inhibits the translation of its target mRNAs (Ramos-Alonso et al., PLoS Genet 14:e1007476, https://doi.org/10.1371/journal.pgen.1007476 , 2018). Interestingly, the mammalian Cth2 ortholog known as tristetraprolin (aka TTP/TIS11/ZFP36), which is also implicated in controlling iron metabolism, promotes the decay and prevents the translation of its regulated transcripts. These observations open the possibility to study the relative contribution of altering mRNA stability and translation to the physiological adaptation to iron deficiency, the function played by the different domains within the mRNA-binding protein, and the potential factors implicated in coordinating both post-transcriptional events.

Indexed as

Gene Expression Regulation, FungalProtein BiosynthesisRNA StabilityAdaptation, PhysiologicalAnimalsHumansIronRNA, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTristetraprolinIronRNA, FungalSaccharomyces cerevisiae ProteinsTIS11 protein, S cerevisiaeTristetraprolinCth2Iron deficiencymRNA degradationProtein translationTristetraprolinYeast

Identifiers

PMID30128746
OpenAlexW2888726234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.