ArticleEcology and evolution2016
Sequencing improves our ability to study threatened migratory species: Genetic population assignment in California's Central Valley Chinook salmon.
Article in Ecology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
13 citing papers in PubMed.
- Diversity Under Pressure: Long-Term Genetic Decline in California's Central Valley Chinook Salmon ESA Listed Runs.Ecology and evolution · 2026Article
- The Genomics Revolution in Nonmodel Species: Predictions vs. Reality for Salmonids.Molecular ecology · 2025Review
- Popfinder: A Highly Effective Artificial Neural Network Package for Genetic Population Assignment.Molecular ecology resources · 2025Article
- Rapid CRISPR-Cas13a genetic identification enables new opportunities for listed Chinook salmon management.Molecular ecology resources · 2025Article
- A Multipurpose Microhaplotype Panel for Genetic Analysis of California Chinook Salmon.Evolutionary applications · 2025Article
- Revealing the evolutionary history and contemporary population structure of Pacific salmon in the Fraser River through genome resequencing.G3 (Bethesda, Md.) · 2024Article
- Migration genetics take flight: genetic and genomic insights into monarch butterfly migration.Current opinion in insect science · 2023Review
- From STRs to SNPs via ddRAD-seq: Geographic assignment of confiscated tortoises at reduced costs.Evolutionary applications · 2022Article
- IIb-RAD-sequencing coupled with random forest classification indicates regional population structuring and sex-specific differentiation in salmon lice (Ecology and evolution · 2022Article
- Genomic data support management of anadromous Arctic Char fisheries in Nunavik by highlighting neutral and putatively adaptive genetic variation.Evolutionary applications · 2021Article
- Population genomics for wildlife conservation and management.Molecular ecology · 2021Review
- Single nucleotide polymorphisms reveal a genetic cline across the north-east Atlantic and enable powerful population assignment in the European lobster.Evolutionary applications · 2019Article
- Sequencing improves our ability to study threatened migratory species: Genetic population assignment in California's Central Valley Chinook salmon.Ecology and evolution · 2016Article
Corrections and comments
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Authors and funding
7 authors.
Funding
Abstract
Effective conservation and management of migratory species requires accurate identification of unique populations, even as they mix along their migratory corridors. While telemetry has historically been used to study migratory animal movement and habitat use patterns, genomic tools are emerging as a superior alternative in many ways, allowing large-scale application at reduced costs. Here, we demonstrate the usefulness of genomic resources for identifying single-nucleotide polymorphisms (SNPs) that allow fast and accurate identification of the imperiled Chinook salmon in the Great Central Valley of California. We show that 80 well-chosen loci, drawn from a pool of over 11,500 SNPs developed from restriction site-associated DNA sequencing, can accurately identify Chinook salmon runs and select populations within run. No other SNP panel for Central Valley Chinook salmon has been able to achieve the high accuracy of assignment we show here. This panel will greatly improve our ability to study and manage this ecologically, economically, and socially important species and demonstrates the great utility of using genomics to study migratory species.
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