Evidence map›Paper›PMID 30127424›Full record

ArticleNature neuroscience2018

In vivo measurement of afferent activity with axon-specific calcium imaging.

Gerard Joey Broussard, Yajie Liang, Marina Fridman, Elizabeth K Unger, Guanghan Meng, Xian Xiao, Na Ji, Leopoldo Petreanu, Lin Tian

Abstract read
In one paragraph

Article in Nature neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed.

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  10. Decomposing the modulation of interactions between neuronal populations.bioRxiv : the preprint server for biology · 2026
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76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gerard Joey BroussardDepartment of Biochemistry and Molecular Medicine, University of California Davis, Davis, CA, USA.
Yajie LiangJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Marina FridmanChampalimaud Center for the Unknown, Lisbon, Portugal.
Elizabeth K UngerDepartment of Biochemistry and Molecular Medicine, University of California Davis, Davis, CA, USA.
Guanghan MengJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Xian XiaoDepartment of Biochemistry and Molecular Medicine, University of California Davis, Davis, CA, USA.
Na JiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Leopoldo PetreanuChampalimaud Center for the Unknown, Lisbon, Portugal. leopoldo.petreanu@neuro.fchampalimaud.org.ORCID http://orcid.org/0000-0003-1434-4691
Lin TianDepartment of Biochemistry and Molecular Medicine, University of California Davis, Davis, CA, USA. lintian@ucdavis.edu.ORCID http://orcid.org/0000-0001-7012-6926

Funding

Validating Theoretical Models with Neurophysiology and OptogeneticsU19NS107613 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MILLER, KENNETH D, SCANZIANI, MASSIMO · 2018 to 2022
$16.7M
Genetically Encoded Localization Modules for Targeting Activity Probes to Specific Subcellular Sites in Brain NeuronsU01NS099714 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TRIMMER, JAMES S · 2016 to 2018
$3.4M
Genetically encoded indicators for large-scale sensing of neuromodulatory signaling in behaving animalsU01NS103522 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI NIMMERJAHN, AXEL, TIAN, LIN · 2017 to 2019
$2.9M
High-Speed Volumetric Imaging of Neural Activity throughout the Living Brain - Supplement RequestU01NS103489 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI JI, NA · 2017 to 2019
$2.7M
Fluorescent biosensors for imaging neurotransmitters: observing synapses in actioDP2MH107056 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TIAN, LIN · 2014 to 2014
$2.3M
Calcium biosensors for deep-tissue imaging and spectral multiplexingU01NS103573 · NINDS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI VERKHUSHA, VLADISLAV · 2017 to 2019
$1.8M
Genetically encoded sensors for the biogenic amine: watching neuromodulation in actionU01NS090604 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TIAN, LIN · 2014 to 2016
$1.3M
Opioid Sensitive GABA inputs to the Ventral MidbrainR01DA034388 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI WILLIAMS, JOHN T · 2012 to 2016
$967k
NIDA NIH HHS R01 DA034388NIMH NIH HHS DP2 MH107056NINDS NIH HHS U01 NS090604NINDS NIH HHS U01 NS099714NINDS NIH HHS U01 NS103489NINDS NIH HHS U01 NS103522NINDS NIH HHS U01 NS103573NINDS NIH HHS U19 NS107613
6 · The paper itself

Abstract

In vivo calcium imaging from axons provides direct interrogation of afferent neural activity, informing the neural representations that a local circuit receives. Unlike in somata and dendrites, axonal recording of neural activity-both electrically and optically-has been difficult to achieve, thus preventing comprehensive understanding of neuronal circuit function. Here we developed an active transportation strategy to enrich GCaMP6, a genetically encoded calcium indicator, uniformly in axons with sufficient brightness, signal-to-noise ratio, and photostability to allow robust, structure-specific imaging of presynaptic activity in awake mice. Axon-targeted GCaMP6 enables frame-to-frame correlation for motion correction in axons and permits subcellular-resolution recording of axonal activity in previously inaccessible deep-brain areas. We used axon-targeted GCaMP6 to record layer-specific local afferents without contamination from somata or from intermingled dendrites in the cortex. We expect that axon-targeted GCaMP6 will facilitate new applications in investigating afferent signals relayed by genetically defined neuronal populations within and across specific brain regions.

Indexed as

AnimalsAxonsCalciumCells, CulturedDendritesFemaleHippocampusMaleMiceNeuroimagingNeurons, AfferentPresynaptic TerminalsProtein EngineeringReceptors, PresynapticCalciumReceptors, Presynaptic

Identifiers

PMID30127424
PMCPMC6697169

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.