Evidence map›Paper›PMID 30124819›Full record

ArticleFEMS microbiology ecology2018

The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks.

Kathleen Trautwein, Michael Hensler, Katharina Wiegmann, Ekaterina Skorubskaya, Lars Wöhlbrand, Daniel Wünsch, Christina Hinrichs, Christoph Feenders, Constanze Müller, Kristina Schell and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 1 country.

Kathleen TrautweinGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Michael HenslerBioinformatics and Biochemistry, Institute for Biochemistry and Biotechnology, Technische Universität Braunschweig, Rebenring 56, Braunschweig 38106, Germany.
Katharina WiegmannGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Ekaterina SkorubskayaGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Lars WöhlbrandGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Daniel WünschGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Christina HinrichsGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Christoph FeendersMathematical Modelling, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Constanze MüllerAnalytical BioGeoChemistry, HelmholtzZentrum München, German Research Centre for Environmental Health, Ingolstädter Landstr. 1, Neuherberg 85764, Germany.
Kristina SchellGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Hanna RuppersbergGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Jannes VagtsGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Sebastian KoßmehlGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Alexander SteinbüchelInstitute for Molecular Microbiology and Biotechnology, WWU Münster, Corrensstr. 3, Münster 48149, Germany.
Philippe Schmidt-KopplinAnalytical BioGeoChemistry, HelmholtzZentrum München, German Research Centre for Environmental Health, Ingolstädter Landstr. 1, Neuherberg 85764, Germany.
Heinz WilkesOrganic Geochemistry, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Helmut HillebrandPlanktology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Bernd BlasiusMathematical Modelling, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Dietmar SchomburgBioinformatics and Biochemistry, Institute for Biochemistry and Biotechnology, Technische Universität Braunschweig, Rebenring 56, Braunschweig 38106, Germany.
Ralf RabusGeneral and Molecular Microbiology, Institute for Chemistry and Biology of the Marine Environment (ICBM), University Oldenburg, Carl-von-Ossietzky Str. 9-11, Oldenburg 26111, Germany.
Carl von Ossietzky Universität Oldenburg · DEHelmholtz Zentrum München · DETechnische Universität Braunschweig · DEHelmholtz Institute for Functional Marine Biodiversity · DEUniversity of Münster · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reduced nitrogen species are key nutrients for biological productivity in the oceans. Ammonium is often present in low and growth-limiting concentrations, albeit peaks occur during collapse of algal blooms or via input from deep sea upwelling and riverine inflow. Autotrophic phytoplankton exploit ammonium peaks by storing nitrogen intracellularly. In contrast, the strategy of heterotrophic bacterioplankton to acquire ammonium is less well understood. This study revealed the marine bacterium Phaeobacter inhibens DSM 17395, a Roseobacter group member, to have already depleted the external ammonium when only ∼⅓ of the ultimately attained biomass is formed. This was paralleled by a three-fold increase in cellular nitrogen levels and rapid buildup of various nitrogen-containing intracellular metabolites (and enzymes for their biosynthesis) and biopolymers (DNA, RNA and proteins). Moreover, nitrogen-rich cells secreted potential RTX proteins and the antibiotic tropodithietic acid, perhaps to competitively secure pulses of external ammonium and to protect themselves from predation. This complex response may ensure growing cells and their descendants exclusive provision with internal nitrogen stocks. This nutritional strategy appears prevalent also in other roseobacters from distant geographical provenances and could provide a new perspective on the distribution of reduced nitrogen in marine environments, i.e. temporary accumulation in bacterioplankton cells.

Indexed as

Ammonium CompoundsAnti-Bacterial AgentsBacterial ProteinsBiomassHeterotrophic ProcessesNitrogenPlanktonRoseobacterSeawaterTropoloneAmmonium CompoundsAnti-Bacterial AgentsBacterial ProteinsNitrogentropodithietic acidTropolone

Identifiers

PMID30124819
PMCPMC6122490
OpenAlexW2885367038

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.