Evidence map›Paper›PMID 30121708›Full record

ReviewExtremophiles : life under extreme conditions2018

Biogeography and taxonomic overview of terrestrial hot spring thermophilic phages.

Olivier Zablocki, Leonardo van Zyl, Marla Trindade

Abstract readReview
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In one paragraph

Review in Extremophiles : life under extreme conditions, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. The Expanding Diversity of Viruses from Extreme Environments.International journal of molecular sciences · 2024
    Review
  5. Review
  6. Review
  7. Potential Applications of Thermophilic Bacteriophages in One Health.International journal of molecular sciences · 2023
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Bacteriophages of Thermophilic 'Microorganisms · 2021
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Olivier ZablockiDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0000-0001-7561-1373
Leonardo van ZylInstitute for Microbial Biotechnology and Metagenomics, University of the Western Cape, Bellville, South Africa.
Marla TrindadeInstitute for Microbial Biotechnology and Metagenomics, University of the Western Cape, Bellville, South Africa. ituffin@uwc.ac.za.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial viruses ("phages") play important roles in the regulation and evolution of microbial communities in most ecosystems. Terrestrial hot springs typically contain thermophilic bacterial communities, but the diversity and impacts of its associated viruses ("thermophilic phages") are largely unexplored. Here, we provide a taxonomic overview of phages that have been isolated strictly from terrestrial hot springs around the world. In addition, we placed 17 thermophilic phage genomes in a global phylogenomic context to detect evolutionary patterns. Thermophilic phages have diverse morphologies (e.g., tailed, filamentous), unique virion structures (e.g., extremely long tailed siphoviruses), and span five taxonomic families encompassing strictly thermophilic phage genera. Within the phage proteomic tree, six thermophilic phage-related clades were identified, with evident genomic relatedness between thermophilic phages and archaeal viruses. Moreover, whole proteome analyses showed clustering between phages that infect distinct host phyla, such as Firmicutes and Deinococcus-Thermus. The potential for discovery of novel phage-host systems in terrestrial hot springs remain mostly untapped, thus additional emphasis on thermophilic phages in ecological prospecting is encouraged to gain insights into the microbial population dynamics of these environments.

Indexed as

PhylogenyBacteriophagesGenome, ViralHot SpringsMetagenomePhylogeographyGammasphaerolipovirusHot springThermophilic phageThermusViral metagenomics

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.