Evidence map›Paper›PMID 30120602›Full record

ArticleFunctional & integrative genomics2019

Genome-wide analysis of oligopeptide transporters and detailed characterization of yellow stripe transporter genes in hexaploid wheat.

Anil Kumar, Gazaldeep Kaur, Parul Goel, Kaushal Kumar Bhati, Mandeep Kaur, Vishnu Shukla, Ajay Kumar Pandey

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Article in Functional & integrative genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

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0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  5. Article
  6. Frontiers in plant science · 2022
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Biofortification and bioavailability of Zn, Fe and Se in wheat: present status and future prospects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  15. Review
  16. Genes · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Anil KumarDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India.
Gazaldeep KaurDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India.
Parul GoelDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India.
Kaushal Kumar BhatiCopenhagen Plant Science Centre, PLEN, University of Copenhagen, Thorvaldsensvej, 40, 1871, Frederiksberg C, Denmark.
Mandeep KaurDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India.
Vishnu ShuklaDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India.
Ajay Kumar PandeyDepartment of Biotechnology, National Agri-Food Biotechnology Institute, Sector 81, Knowledge City, Mohali, Punjab, 140306, India. pandeyak@nabi.res.in.ORCID http://orcid.org/0000-0003-1064-139X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oligopeptide transporters (OPT) are integral cell membrane proteins that play a critical role in the transport of small peptides, secondary amino acids, glutathione conjugates, and mineral uptake. In the present study, 67 putative wheat yellow stripe-like transporter (YSL) proteins belonging to the subfamily of OPT transporters were identified. Phylogeny analysis resulted in the distribution of wheat YSLs into four discrete clades. The highest number of YSLs was present on the A genome and the chromosome 2 of hexaploid wheat. The identified wheat YSL genes showed differential expression in different tissues and during grain development suggesting the importance of this subfamily. Gene expression pattern of TaYSLs during iron starvation experiments suggested an early high transcript accumulation of TaYS1A, TaYS1B, TaYSL3, TaYSL5, and TaYSL6 in roots. In contrast, delayed expression was observed in shoots for TaYS1A, TaYS1B, TaYSL5, TaYSL12, and TaYSL19 as compared to control. Further, their expression under biotic and abiotic response emphasized their alternative functions during the plant growth and development. In conclusion, this work is the first comprehensive study of wheat YSL transporters and would be an important resource for prioritizing genes towards wheat biofortification.

Indexed as

Gene Expression Regulation, PlantGenome, PlantIron DeficienciesChromosome MappingChromosomes, PlantGene Expression Regulation, DevelopmentalGene OntologyIon TransportMembrane Transport ProteinsMolecular Sequence AnnotationPhylogenyPlant RootsPlant ShootsPolyploidyRNA, MessengerStress, PhysiologicalMembrane Transport ProteinsRNA, MessengerBiofortificationIron starvationIron transportTriticum aestivumYellow stripe-like transporters

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.