Evidence map›Paper›PMID 30120289›Full record

ArticleScientific reports2018

A novel ZIC3 gene mutation identified in patients with heterotaxy and congenital heart disease.

Shuolin Li, Sida Liu, Weicheng Chen, Yuan Yuan, Ruoyi Gu, Yangliu Song, Jian Li, Yinyin Cao, Yixiang Lin, Jun Xu and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. CFrontiers in neurology · 2020
    Review
  8. Review
  9. A novel conserved enhancer at zebrafish zic3 and zic6 loci drives neural expression.Developmental dynamics : an official publication of the American Association of Anatomists · 2019
    Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Shuolin LiChildren's Hospital of Fudan University, Shanghai, 201102, China.
Sida LiuChildren's Hospital of Fudan University, Shanghai, 201102, China.
Weicheng ChenChildren's Hospital of Fudan University, Shanghai, 201102, China.
Yuan YuanChildren's Hospital of Fudan University, Shanghai, 201102, China.
Ruoyi GuChildren's Hospital of Fudan University, Shanghai, 201102, China.
Yangliu SongChildren's Hospital of Fudan University, Shanghai, 201102, China.
Jian LiChildren's Hospital of Fudan University, Shanghai, 201102, China.
Yinyin CaoChildren's Hospital of Fudan University, Shanghai, 201102, China.
Yixiang LinChildren's Hospital of Fudan University, Shanghai, 201102, China.
Jun XuChildren's Hospital of Fudan University, Shanghai, 201102, China.
Huijun WangChildren's Hospital of Fudan University, Shanghai, 201102, China.
Duan MaShanghai Key Laboratory of Birth Defects, Shanghai, 201102, China.
Xiaojing MaChildren's Hospital of Fudan University, Shanghai, 201102, China.
Wei ShengChildren's Hospital of Fudan University, Shanghai, 201102, China. Sheng4616@126.com.
Guoying HuangChildren's Hospital of Fudan University, Shanghai, 201102, China. gyhuang@shmu.edu.cn.
Children's Hospital of Fudan University · CNShanghai Medical College of Fudan University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81370198National Natural Science Foundation of China (National Science Foundation of China) 81570283
6 · The paper itself

Abstract

Heterotaxy syndrome (HTX) is characterized by left-right (LR) asymmetry disturbances associated with severe heart malformations. However, the exact genetic cause of HTX pathogenesis remains unclear. The aim of this study was to investigate the pathogenic mechanism underlying heterotaxy syndrome. Targeted next-generation sequencing (NGS) was performed for twenty-two candidate genes correlated with LR axis development in sixty-six HTX patients from unrelated families. Variants were filtered from databases and predicted in silico using prediction programs. A total of twenty-one potential disease-causing variants were identified in seven genes. Next, we used Sanger sequencing to confirm the identified variants in the family pedigree and found a novel hemizygous mutation (c.890G > T, p.C297F) in the ZIC3 gene in a male patient that was inherited from his mother, who was a carrier. The results of functional indicated that this ZIC3 mutation decreases transcriptional activity, affects the affinity of the GLI-binding site and results in aberrant cellular localization in transfected cells. Moreover, morpholino-knockdown experiments in zebrafish demonstrated that zic3 mutant mRNA failed to rescue the abnormal phenotype, suggesting a role for the novel ZIC3 mutation in heterotaxy syndrome.

Indexed as

MutationAdolescentAdultAgedAnimalsChildDNA Mutational AnalysisFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHeart Defects, CongenitalHeterotaxy SyndromeHomeodomain ProteinsHumansMaleHomeodomain ProteinsTranscription FactorsZIC3 protein, human

Identifiers

PMID30120289
PMCPMC6098004
OpenAlexW2885672153

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.