Evidence map›Paper›PMID 30119682›Full record

ArticleLipids in health and disease2018

Vitamin D receptor polymorphism rs2228570 is significantly associated with risk of dyslipidemia and serum LDL levels in Chinese Han population.

Jian Jia, Yayu Tang, Chong Shen, Ning Zhang, Haixia Ding, Yiyang Zhan

Open access · goldAbstract read
In one paragraph

Article in Lipids in health and disease, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  4. Review
  5. Observational
  6. Article
  7. Article
  8. Article
  9. Vitamin D receptor gene polymorphisms in atopy.Immunity, inflammation and disease · 2021
    Review
  10. Article
  11. Vitamin D receptor geneTranslational pediatrics · 2021
    Article
  12. Article
  13. Association Between Single Nucleotide Polymorphisms in the Vitamin D Receptor and Incidence of Dry Eye Disease in Chinese Han Population.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jian JiaGeneral Internal Medicine Department, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Yayu TangGeriatric Medicine Department, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Chong ShenDepartment of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, Nanjing City, Jiangsu Province, China.
Ning ZhangGeriatric Medicine Department, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Haixia DingGeriatric Medicine Department, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Yiyang ZhanGeriatric Medicine Department, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. yiyangzhan@sina.com.
Jiangsu Province Hospital · CNNanjing Medical University · CN

Funding

National Natural Science Foundation of China 81570810Project funded by Jiangsu Province Health Commission H201402Technology Project of Jiangsu Province 2014085
6 · The paper itself

Abstract

backgroundThe goal of this study was to determine if vitamin D receptor (VDR) gene polymorphisms underlie susceptibility to dyslipidemia in a Chinese Han population.

methodsThree tag single nucleotide polymorphisms (SNPs) (rs11574129, rs2228570, and rs739837) were genotyped using TaqMan assays to determine VDR SNP associations with dyslipidemia. We genotyped 877 cases of dyslipidemia from a normotensive, non-diabetes mellitus population and 1822 non-dyslipidemia subjects in a stage I study. In a follow-up stage II study, we included a larger sample of 3124 controls and 1679 cases with dyslipidemia. Finally, we explored the potential molecular mechanism for the SNP associations using molecular modeling analysis.

resultsWe found a significant association between SNP rs2228570 and dyslipidemia in the additive (adjusted odds ratio (OR) = 1.255, 95% Confidence Interval (CI) = (1.118-1.409), P < 0.001), dominant (OR = 1.384, 95% CI = 1.384 (1.136-1.6), P = 0.001) and recessive models (OR = 1.356, 95%CI = 1.1-1.671, P = 0.004) in stage I. We further established that the rs2228570 variant was significantly associated with dyslipidemia in the additive (adjusted OR = 1.146, 95% CI = 1.053-1247, P = 0.002), dominant (OR = 1.184, 95%CI =1.018-1.376, P = 0.028) and recessive models (OR = 1.209, 95%CI = 1.064-1.374, P = 0.004) in stage II. The TT genotype was significantly higher (4.93 ± 0.75 mmol/L) compared to the TC (4.67 ± 0.47 mmol/L) or CC (4.66 ± 0.44 mmol/L) genotype (P = 0.01) in cases with elevated low-density lipoprotein cholesterol (LDL-C) levels. In contrast, the cases with the TT genotype had significantly lower serum 25(OH)D levels (18.43 ± 5.04 ng/ mL) compared to the TC (26.24 ± 4.16 ng/mL) and CC (36.76 ± 8.10 ng/ mL) genotypes (P < 0.001). Multivariable linear regression analysis indicated that the rs2228750 genotype significantly correlated with serum low-density lipoprotein-C (LDL-C) levels in cases with dyslipidemia. Using molecular modeling analysis, we further found that the rs2228570 variant changed the structure and the stability of VDR and altered the binding energy of its ligand.

conclusionsThe VDR rs2228570 variant may increase susceptibility to dyslipidemia in the Chinese Han population.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAsian PeopleCase-Control StudiesDyslipidemiasEthnicityFemaleHumansLigandsLinear ModelsLipoproteins, LDLMaleModels, MolecularMutant ProteinsPolymorphism, Single NucleotideReceptors, Calcitriol25-hydroxyvitamin DLigandsLipoproteins, LDLMutant ProteinsReceptors, CalcitriolVDR protein, humanVitamin DChineseDyslipidemiaPolymorphismVitamin D receptor

Identifiers

PMID30119682
PMCPMC6098609
OpenAlexW2887297611

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.