Evidence map›Paper›PMID 30119674›Full record

ArticleMicrobial cell factories2018

A novel method for transforming the thermophilic bacterium Geobacillus kaustophilus.

Megumi Miyano, Kosei Tanaka, Shu Ishikawa, Kotaro Mori, Andrés Miguel-Arribas, Wilfried J J Meijer, Ken-Ichi Yoshida

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Megumi MiyanoDepartment of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657 8501, Japan.
Kosei TanakaDepartment of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657 8501, Japan.
Shu IshikawaDepartment of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657 8501, Japan.
Kotaro MoriDepartment of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657 8501, Japan.
Andrés Miguel-ArribasCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Instituto de Biología Molecular 'Eladio Viñuela' (CSIC), Universidad Autónoma, Canto Blanco, 28049, Madrid, Spain.
Wilfried J J MeijerCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Instituto de Biología Molecular 'Eladio Viñuela' (CSIC), Universidad Autónoma, Canto Blanco, 28049, Madrid, Spain. wmeijer@cbm.csic.es.
Ken-Ichi YoshidaDepartment of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657 8501, Japan. kenyoshi@kobe-u.ac.jp.ORCID http://orcid.org/0000-0002-3383-4664
Kobe University · JPCentro de Biología Molecular Severo Ochoa · ES

Funding

Ministerio de Economía, Industria y Competitividad, Gobierno de España Bio2013-41489-PMinisterio de Economía, Industria y Competitividad, Gobierno de España BIO2016-77883-C2-1-PMinistry of Education, Culture, Sports, Science and Technology 17K19237Ministry of Education, Culture, Sports, Science and Technology 18H02128
6 · The paper itself

Abstract

backgroundBacterial strains of the genus Geobacillus grow at high temperatures of 50-75 °C and could thus be useful for biotechnological applications. However, genetic manipulation of these species is difficult because the current techniques for transforming Geobacillus species are not efficient. In this study, we developed an easy and efficient method for transforming Geobacillus kaustophilus using the conjugative plasmid pLS20cat.

resultsWe constructed a transformation system comprising (i) a mobilizable Bacillus subtilis-G. kaustophilus shuttle plasmid named pGK1 that carries the elements for selection and replication in Geobacillus, and (ii) a pLS20cat-harboring B. subtilis donor strain expressing the dam methylase gene of Escherichia coli and the conjugation-stimulating rap

conclusionsWe describe a novel method of plasmid mobilization into G. kaustophilus recipient from B. subtilis donor depending on the helper function of pLS20cat, which enables simple, rapid, and easy transformation of the thermophilic Gram-positive bacterium.

Indexed as

Bacillus subtilisGeobacillusPlasmidsBacillus subtilisConjugationGeobacillus kaustophilusMobilizationPlasmidTransformation

Identifiers

PMID30119674
PMCPMC6098629
OpenAlexW2887654574

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.