Evidence map›Paper›PMID 30116789›Full record

ArticlemSystems

Genomic Characterization and Copy Number Variation of

Angela Pena-Gonzalez, Luis M Rodriguez-R, Chung K Marston, Jay E Gee, Christopher A Gulvik, Cari B Kolton, Elke Saile, Michael Frace, Alex R Hoffmaster, Konstantinos T Konstantinidis

Open access · goldAbstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Machine Learning-Based Characterization ofPathogens (Basel, Switzerland) · 2025
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  5. Evaluating the Safety ofMicroorganisms · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. New Research on thePathogens (Basel, Switzerland) · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Rapid Identification of Bacillus anthracisMicrobiology spectrum · 2022
    Article
  15. Article
  16. Welder's Anthrax: A Review of an Occupational Disease.Pathogens (Basel, Switzerland) · 2022
    Review
  17. Translational demand is not a major source of plasmid-associated fitness costs.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  18. Article
  19. Ultrasensitive Detection ofInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Angela Pena-GonzalezSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0003-0684-8179
Luis M Rodriguez-RSchool of Civil & Environmental Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0001-7603-3093
Chung K MarstonBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Jay E GeeBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Christopher A GulvikBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Cari B KoltonBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Elke SaileBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Michael FraceBiotechnology Core Facility Branch, Division of Scientific Resources, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Alex R HoffmasterBacterial Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Konstantinos T KonstantinidisSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, USA.
Centers for Disease Control and Prevention · USGeorgia Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus anthracis plasmids pXO1 and pXO2 carry the main virulence factors responsible for anthrax. However, the extent of copy number variation within the species and how the plasmids are related to pXO1/pXO2-like plasmids in other species of the Bacillus cereus

Indexed as

anthrax-like B. cereusBacillus anthracispathogenomicsphylogenomicspXO1pXO2

Identifiers

PMID30116789
PMCPMC6093989
OpenAlexW2887334857

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.