Evidence map›Paper›PMID 30115950›Full record

ArticleJournal of human genetics2018

Whole-exome sequencing reveals known and novel variants in a cohort of intracranial vertebral-basilar artery dissection (IVAD).

Kun Wang, Sen Zhao, Qianqian Zhang, Jian Yuan, Jiaqi Liu, Xinghuan Ding, Xiaofei Song, Jiachen Lin, Renqian Du, Yangzhong Zhou and 19 more

Open access · hybridAbstract read
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In one paragraph

Article in Journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Exome sequencing reveals a novel variant inJournal of neurointerventional surgery · 2020
    Article
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  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 7 institutions in 3 countries.

Kun WangDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Sen ZhaoBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Qianqian ZhangDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Jian YuanSchool of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou, China.
Jiaqi LiuBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Xinghuan DingDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Xiaofei SongDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Jiachen LinDepartment of Orthopedic Surgery, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Renqian DuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Yangzhong ZhouBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Michihiko SugimotoTechnology and Development Team for Mammalian Cellular Dynamics, RIKEN BioResource Center, Tsukuba, Japan.
Weisheng ChenBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Bo YuanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Jian LiuDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Zihui YanBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Bowen LiuBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Yisen ZhangDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Xiaoxin LiBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Yuchen NiuBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China.
Bo LongDepartment of Central Laboratory, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Yiping ShenDivision of Genetics and Genomics, Boston Childrens Hospital, Department of Neurology, Harvard Medical School, Boston, MA, USA.
Shuyang ZhangDepartment of Cardiology, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Kuniya AbeTechnology and Development Team for Mammalian Cellular Dynamics, RIKEN BioResource Center, Tsukuba, Japan.
Jianzhong SuSchool of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou, China.
Zhihong WuDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Nan WuBeijing Key Laboratory for Genetic Research of Skeletal Deformity, Beijing, China. dr.wunan@pumch.cn.ORCID http://orcid.org/0000-0002-9429-2889
Pengfei LiuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA. pengfeil@bcm.edu.
Xinjian YangDepartment of Interventional Neuroradiology, Beijing Neurosurgical Institute and Beijing Tiantan Hospital, Capital Medical University, Beijing, China. yangxinjian@bjttyy.org.
Deciphering Disorders Involving Scoliosis & Comorbidities (DISCO) study
Chinese Academy of Medical Sciences & Peking Union Medical College · CNCapital Medical University · CNBaylor College of Medicine · USRIKEN BioResource Research Center · JPWenzhou Medical University · CNBoston Children's Hospital · USJiangnan University · CN

Funding

Beijing Nova Program No. Z161100004916123National Natural Science Foundation of China (National Science Foundation of China) No. 81501852Natural Science Foundation of Beijing Municipality (Beijing Natural Science Foundation) No. 7172175
6 · The paper itself

Abstract

Intracranial vertebral-basilar artery dissection (IVAD) is an arterial disorder leading to life-threatening consequences. Genetic factors are known to be causative to certain syndromic forms of IVAD. However, systematic study of the molecular basis of sporadic and isolated IVAD is lacking. To identify genetic variants contributing to the etiology of IVAD, we enrolled a cohort of 44 unrelated cases with a clinical diagnosis of isolated IVAD and performed whole-exome sequencing (WES) for all the participants; a trio exome sequencing approach was used when samples from both parents were available. Four previously reported disease-causing heterozygous variants (three in COL3A1 and one in FBN1) and seven novel heterozygous variants in IVAD-related genes were identified. In addition, six variants in novel IVAD genes including two de novo heterozygous nonsynonymous variants (each in VPS52 and CDK18), two stop-gain variants (each in MYH9 and LYL1), and two heterozygous biallelic variants in TNXB were considered to be possibly contributing to the phenotype, with unknown significance according to the existing knowledge. A significantly higher mutational rate of IVAD candidate genes was observed in patients versus our in-house controls (P = 0.002) (DISCO study, http://www.discostudy.org/ , n = 2248). Our study provided a mutational landscape for patients with isolated IVAD.

Indexed as

ExomeHigh-Throughput Nucleotide SequencingAdipokinesAdultAortic DissectionBasic Helix-Loop-Helix ProteinsCohort StudiesCollagen Type IIIFemaleFibrillin-1HumansIntracranial AneurysmMaleMiddle AgedMolecular Motor ProteinsMyosin Heavy ChainsAdipokinesBasic Helix-Loop-Helix ProteinsCOL3A1 protein, humanCollagen Type IIIFBN1 protein, humanFibrillin-1LYL1 protein, humanMolecular Motor ProteinsMYH9 protein, humanMyosin Heavy ChainsNeoplasm Proteins

Identifiers

PMID30115950
OpenAlexW2887369619

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.