Evidence map›Paper›PMID 30115684›Full record

ArticleThe Journal of biological chemistry2018

Metabolic labeling of HIV-1 envelope glycoprotein gp120 to elucidate the effect of gp120 glycosylation on antigen uptake.

Lina Sun, Mayumi Ishihara, Dustin R Middleton, Michael Tiemeyer, Fikri Y Avci

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lina SunFrom the Department of Biochemistry and Molecular Biology, Center for Molecular Medicine and.
Mayumi IshiharaComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Dustin R MiddletonFrom the Department of Biochemistry and Molecular Biology, Center for Molecular Medicine and.ORCID 0000-0001-8973-9116
Michael TiemeyerComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Fikri Y AvciFrom the Department of Biochemistry and Molecular Biology, Center for Molecular Medicine and avci@uga.edu.ORCID 0000-0002-1902-7532
University of Georgia · US

Funding

TR&D1: Stem Cell and Induced Pluripotent Stem Cell Resources (Pages 116-134)P41GM103490 · NIGMS · UNIVERSITY OF GEORGIA · PI PIERCE, J. MICHAEL · 2012 to 2018
$13.7M
Molecular Mechanisms for Carbohydrate Presentation to CD4+ T cells by MHCII PathwayR01AI123383 · NIAID · UNIVERSITY OF GEORGIA · PI Fikri Y Avci · 2016 to 2026
$4.2M
NIAID NIH HHS R01 AI123383NIGMS NIH HHS P41 GM103490
6 · The paper itself

Abstract

The glycan shield on the envelope glycoprotein gp120 of HIV-1 has drawn immense attention as a vulnerable site for broadly neutralizing antibodies and for its significant impact on host adaptive immune response to HIV-1. Glycosylation sites and glycan composition/structure at each site on gp120 along with the interactions of gp120 glycan shield with broadly neutralizing antibodies have been extensively studied. However, a method for directly and selectively tracking gp120 glycans has been lacking. Here, we integrate metabolic labeling and click chemistry technology with recombinant gp120 expression to demonstrate that gp120 glycans could be specifically labeled and directly detected. Selective labeling of gp120 by

Indexed as

Antibodies, NeutralizingAntigensAzidesBone Marrow CellsCell DifferentiationDendritic CellsGlycopeptidesGlycosylationHEK293 CellsHexosaminesHIV-1HIV AntibodiesHIV Envelope Protein gp120Host-Pathogen InteractionsHumansMetabolismAntibodies, NeutralizingAntigensAzidesGlycopeptidesHexosaminesHIV AntibodiesHIV Envelope Protein gp120N-azidoacetylmannosaminePolysaccharidesantigenclick chemistryglycoproteinmetabolic engineeringN-linked glycosylation

Identifiers

PMID30115684
PMCPMC6166730
OpenAlexW2887455109

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.