Evidence map›Paper›PMID 30115681›Full record

ArticleThe Journal of biological chemistry2018

Mechanism of dysfunction of human variants of the IRAK4 kinase and a role for its kinase activity in interleukin-1 receptor signaling.

Saurav De, Fawziya Karim, Ezechielle Kiessu, Leah Cushing, Lih-Ling Lin, Pegah Ghandil, Cyrille Hoarau, Jean-Laurent Casanova, Anne Puel, Vikram R Rao

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

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  18. Protein phosphatases in TLR signaling.Cell communication and signaling : CCS · 2021
    Review
  19. Article
  20. Kinase inhibition in autoimmunity and inflammation.Nature reviews. Drug discovery · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Saurav DeFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139.
Fawziya KarimFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139.
Ezechielle KiessuFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139.
Leah CushingFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139.
Lih-Ling LinFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139.
Pegah Ghandilthe Diabetes Research Center and.
Cyrille Hoarauthe Transversal Unit of Allergology and Clinical Immunology, Regional University Hospital Center of Tours, 37044 Tours cedex 9, France, and.
Jean-Laurent Casanovathe Imagine Institute, Paris Descartes University, 75015 Paris, France.
Anne Puelthe Imagine Institute, Paris Descartes University, 75015 Paris, France.ORCID 0000-0003-2603-0323
Vikram R RaoFrom the Inflammation and Immunology Research Unit, Pfizer Inc., Cambridge, Massachusetts 02139, vikram.rao@pfizer.com.
Pfizer (United States) · USAhvaz Jundishapur University of Medical Sciences · IRInserm · FRRockefeller University · USUniversité de Tours · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interleukin-1 receptor (IL1R)-associated kinase 4 (IRAK4) is a central regulator of innate immune signaling, controlling IL1R and Toll-like receptor (TLR)-mediated responses and containing both scaffolding and kinase activities. Humans deficient in IRAK4 activity have autosomal recessive primary immune deficiency (PID). Here, we characterized the molecular mechanism of dysfunction of two IRAK4 PID variants, G298D and the compound variant R12C (R12C/R391H/T458I). Using these variants and the kinase-inactive D329A variant to delineate the contributions of IRAK4's scaffolding and kinase activities to IL1R signaling, we found that the G298D variant is kinase-inactive and expressed at extremely low levels, acting functionally as a null mutation. The R12C compound variant possessed WT kinase activity, but could not interact with myeloid differentiation primary response 88 (MyD88) and IRAK1, causing impairment of IL-1-induced signaling and cytokine production. Quantitation of IL-1 signaling in IRAK4-deficient cells complemented with either WT or the R12C or D329A variant indicated that the loss of MyD88 interaction had a greater impact on IL-1-induced signaling and cytokine expression than the loss of IRAK4 kinase activity. Importantly, kinase-inactive IRAK4 exhibited a greater association with MyD88 and a weaker association with IRAK1 in IRAK4-deficient cells expressing kinase-inactive IRAK4 and in primary cells treated with a selective IRAK4 inhibitor. Loss of IRAK4 kinase activity only partially inhibited IL-1-induced cytokine and NF-κB signaling. Therefore, the IRAK4-MyD88 scaffolding function is essential for IL-1 signaling, but IRAK4 kinase activity can control IL-1 signal strength by modulating the association of IRAK4, MyD88, and IRAK1.

Indexed as

Cell LineCrystallography, X-RayHumansImmunity, InnateImmunologic Deficiency SyndromesInterleukin-1Interleukin-1 Receptor-Associated KinasesMutationMyeloid Differentiation Factor 88NF-kappa BPolymorphism, Single NucleotideReceptors, Interleukin-1Signal TransductionInterleukin-1Interleukin-1 Receptor-Associated KinasesIRAK1 protein, humanIRAK4 protein, humanMyeloid Differentiation Factor 88NF-kappa BReceptors, Interleukin-1cell signalingcytokineinflammationinnate immunityinterleukin 1 (IL-1)interleukin-1 receptor-associated kinase 4 (IRAK4)myeloid differentiation primary response gene 88 (MyD88)protein kinaseToll/interleukin-1 receptor (TIR)

Identifiers

PMID30115681
PMCPMC6166721
OpenAlexW2885448330

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.