Evidence map›Paper›PMID 30115101›Full record

ArticleGenome biology2018

Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data.

Michael Alaux, Jane Rogers, Thomas Letellier, Raphaël Flores, Françoise Alfama, Cyril Pommier, Nacer Mohellibi, Sophie Durand, Erik Kimmel, Célia Michotey and 15 more

Abstract read
In one paragraph

Article in Genome biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed.

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  12. Development of wheat D genome-specific molecular markers based on subgenome-specific repeats.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
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78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Michael AlauxURGI, INRA, Université Paris-Saclay, 78026, Versailles, France. michael.alaux@inra.fr.ORCID 0000-0001-9356-4072
Jane RogersInternational Wheat Genome Sequencing Consortium (IWGSC), 18 High Street, Little Eversden, Cambridge, CB23 1HE, UK.
Thomas LetellierURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Raphaël FloresURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Françoise AlfamaURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Cyril PommierURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Nacer MohellibiURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Sophie DurandURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Erik KimmelURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Célia MichoteyURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Claire GuercheURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Mikaël LoaecURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Mathilde LainéURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Delphine SteinbachURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Frédéric ChouletGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Hélène RimbertGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Philippe LeroyGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Nicolas GuilhotGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Jérôme SalseGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Catherine FeuilletGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
International Wheat Genome Sequencing Consortium
Etienne PauxGDEC, INRA, Université Clermont Auvergne, 63000, Clermont-Ferrand, France.
Kellye EversoleInternational Wheat Genome Sequencing Consortium (IWGSC), 5207 Wyoming Road, Bethesda, Maryland, 20816, USA.
Anne-Françoise Adam-BlondonURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.
Hadi QuesnevilleURGI, INRA, Université Paris-Saclay, 78026, Versailles, France.

Funding

Agence Nationale de la Recherche ANR-09-GENM-025Agence Nationale de la Recherche ANR-10-BTBR-03Seventh Framework Programme FP7-283496Seventh Framework Programme FP7-613556Seventh Framework Programme FP7-KBBE-212019
6 · The paper itself

Abstract

The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wheat Genome Sequencing Consortium. Genome browsers, BLAST, and InterMine tools have been established for in-depth exploration of the genome sequence together with additional linked datasets including physical maps, sequence variations, gene expression, and genetic and phenomic data from other international collaborative projects already stored in the GnpIS information system. The portal provides enhanced search and browser features that will facilitate the deployment of the latest genomics resources in wheat improvement.

Indexed as

Genome, PlantSequence Analysis, DNABase SequenceBreadData MiningGene Expression Regulation, PlantGenes, PlantPhenotypeReference StandardsTriticumBig dataData integrationInformation systemWheat genomics, genetics and phenomics

Identifiers

PMID30115101
PMCPMC6097284

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.