Evidence map›Paper›PMID 30115016›Full record

ArticleBMC cancer2018

Differential expression of Cosmc, T-synthase and mucins in Tn-positive colorectal cancers.

Xiaodong Sun, Tongzhong Ju, Richard D Cummings

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 90 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Xiaodong SunDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, 3 Blackfan Circle, Room 11087, Boston, MA, 02115, USA. sunxdsimon@gmail.com.
Tongzhong JuDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA. tongzhong.ju@fda.hhs.gov.
Richard D CummingsDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School, 3 Blackfan Circle, Room 11087, Boston, MA, 02115, USA. rcummin1@bidmc.harvard.edu.ORCID http://orcid.org/0000-0002-8918-5034
Beth Israel Deaconess Medical Center · USCenter for Drug Evaluation and Research · US

Funding

THE TUMOR ANTIGENS TN AND SIALYLTN IN HUMAN COLORECTAL CARCINOMAU01CA168930 · NCI · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, SMITH, DAVID FLETCHER · 2012 to 2016
$2.0M
National Cancer Institute U01CA168930NCI NIH HHS U01 CA168930
6 · The paper itself

Abstract

backgroundThe Tn neoantigen (GalNAcα1-O-Ser/Thr) is an O-glycan expressed in various types of human cancers. Studies in several Tn-expressing cancer cell lines and pancreatic tumors have identified loss of Cosmc expression caused by either mutations or promoter hypermethylation. In this study, we explored the mechanism(s) for Tn expression in human colorectal cancers (CRC).

methodsTn-expressing cell populations were isolated from CRC cell lines by Fluorescence-associated cell sorting (FACS). The expression of the Tn and sialylated Tn (STn) antigens, Cosmc, T-synthase, and mucins was characterized in paired specimens with CRC and in CRC cell lines by immunostaining, western blot, and qPCR.

resultsUsing well-defined monoclonal antibodies, we confirmed prevalent Tn/STn expression in CRC samples. However, a majority of these tumors had elevated T-synthase activity and expression of both Cosmc and T-synthase proteins. Meanwhile, Tn antigen expression was not caused by mucin overproduction. In addition, we found that Tn-expressing CRC cell lines had either loss-of-function mutations in Cosmc or reversible Tn antigen expression, which was not caused by the deficiency of T-synthase activity.

conclusionsOur results demonstrate multiple mechanisms for Tn expression in CRCs.

Indexed as

Antigens, Tumor-Associated, CarbohydrateCell LineageCell Line, TumorColorectal NeoplasmsDNA MethylationFemaleFlow CytometryGalactosyltransferasesGene Expression Regulation, NeoplasticGlycosylationHumansMaleMolecular ChaperonesMucin-1MutationN-Acetylneuraminic AcidAntigens, Tumor-Associated, CarbohydrateC1GALT1C1 protein, humanC1GALT1 protein, humanGalactosyltransferasesMolecular ChaperonesMUC1 protein, humanMucin-1N-Acetylneuraminic AcidTn antigenColorectal carcinomaCosmcMutationSTn antigenTn antigenT-synthase

Identifiers

PMID30115016
PMCPMC6097208
OpenAlexW2887578848

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.