Evidence map›Paper›PMID 30113565›Full record

ArticleOtology & neurotology : official publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology2018

The SLC26A4 c.706C>G (p.Leu236Val) Variant is a Frequent Cause of Hearing Impairment in Filipino Cochlear Implantees.

Charlotte M Chiong, Ma Rina T Reyes-Quintos, Talitha Karisse L Yarza, Celina Ann M Tobias-Grasso, Anushree Acharya, Suzanne M Leal, Karen L Mohlke, Nanette L Mayol, Eva Maria Cutiongco-de la Paz, Regie Lyn P Santos-Cortez

Abstract read
In one paragraph

Article in Otology & neurotology : official publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Lack of Methylation Changes inActa medica Philippina · 2023
    Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 9 institutions in 5 countries.

Charlotte M ChiongPhilippine National Ear Institute.
Ma Rina T Reyes-QuintosPhilippine National Ear Institute.
Talitha Karisse L YarzaPhilippine National Ear Institute.
Celina Ann M Tobias-GrassoMED-EL, Innsbruck, Austria.
Anushree AcharyaCenter for Statistical Genetics, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Suzanne M LealCenter for Statistical Genetics, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Karen L MohlkeDepartment of Genetics, University of North Carolina, Chapel Hill, North Carolina.
Nanette L MayolOffice of Population Studies Foundation.
Eva Maria Cutiongco-de la PazUniversity of the Philippines Manila-National Institutes of Health.
Regie Lyn P Santos-CortezDepartment of Otolaryngology, University of Colorado School of Medicine, Aurora, Colorado.
National Veterinary Institute · ETBaylor College of Medicine · USBaylor Genetics · USMED-EL (Austria) · ATPopulation Council · INScreen · USUniversity of Colorado Denver · USUniversity of North Carolina at Chapel Hill · USUniversity of the Philippines Manila · PH

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUSAN M. SMITH · 1999 to 2026
$31.6M
Identification of Nonsyndromic Hearing Impairment GenesR01DC003594 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SUZANNE M LEAL · 2004 to 2026
$7.7M
Localization of Nonsyndromic Hearing Impairment GenesR01DC011651 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LEAL, SUZANNE M · 2011 to 2020
$2.9M
Genetic Epidemiology of Body Mass Index, Adiposity and Weight GainR01DK078150 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MOHLKE, KAREN L. · 2007 to 2010
$2.3M
Obesity development and CVD risk factor--Filipino womenR01HL085144 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ADAIR, LINDA S · 2006 to 2009
$1.9M
An Interdisciplinary Strategy for Obesity (RMI)P20RR020649 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI POPKIN, BARRY M · 2004 to 2006
$1.7M
Effect of Health on Education &Work in Filipino YouthR01TW005596 · FIC · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI ADAIR, LINDA S · 2001 to 2005
$1.5M
Weight, Diet, Genes and CVD Risk Factors (Hypertension and Diabetes)R01TW008288 · FIC · UNIVERSITY OF SAN CARLOS · PI MAYOL, NANETTE LEE · 2009 to 2011
$152k
FIC NIH HHS R01 TW005596FIC NIH HHS R01 TW008288NCRR NIH HHS P20 RR020649NHLBI NIH HHS R01 HL085144NIDCD NIH HHS R01 DC003594NIDCD NIH HHS R01 DC011651NIDDK NIH HHS P30 DK056350NIDDK NIH HHS R01 DK078150NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

hypothesisVariants in SLC26A4 are an important cause of congenital hearing impairment in the Philippines.

backgroundCochlear implantation is a standard rehabilitation option for congenital hearing impairment worldwide, but places a huge cost burden in lower-income countries. The study of risk factors such as genetic variants that may help determine genetic etiology of hearing loss and also predict cochlear implant outcomes is therefore beneficial.

methodsDNA samples from 29 GJB2-negative Filipino cochlear implantees were Sanger-sequenced for the coding exons of SLC26A4. Exome sequencing was performed to confirm results.

resultsFour cochlear implantees with bilaterally enlarged vestibular aqueducts (EVA) were homozygous for the pathogenic SLC26A4 c.706C>G (p.Leu236Val) variant, which has a minor allele frequency of 0.0015 in Filipino controls. In patients with the SLC26A4 variant there was no association between cochlear implant outcome and age at implantation or duration of implant. There was also no association between the occurrence of the SLC26A4 variant and postsurgical audiometric thresholds and parents' evaluation of aural/oral performance of children (PEACH) scores. On the other hand, the SLC26A4 variant increased presurgical median audiometric thresholds (p = 0.01), particularly at 500 to 2000 Hz.

conclusionThe SLC26A4 c.706C>G (p.Leu236Val) variant is a frequent cause of congenital hearing impairment in Filipinos and is associated with bilateral EVA and increased presurgical audiometric thresholds, but does not adversely affect post-implant outcomes.

Indexed as

Cochlear ImplantationCochlear ImplantsMutationAdolescentAllelesChildChild, PreschoolExonsFemaleGene FrequencyHearing LossHumansInfantMalePhilippinesSulfate TransportersSLC26A4 protein, humanSulfate Transporters

Identifiers

PMID30113565
PMCPMC6097524
OpenAlexW2887159609

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.