Evidence map›Paper›PMID 30113227›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2018

Early airway microbial metagenomic and metabolomic signatures are associated with development of severe bronchopulmonary dysplasia.

Charitharth Vivek Lal, Jegen Kandasamy, Kalsang Dolma, Manimaran Ramani, Ranjit Kumar, Landon Wilson, Zubair Aghai, Stephen Barnes, J Edwin Blalock, Amit Gaggar and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
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  8. The neonate respiratory microbiome.Acta physiologica (Oxford, England) · 2025
    Review
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  13. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Charitharth Vivek LalDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.ORCID 0000-0001-9071-4047
Jegen KandasamyDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.
Kalsang DolmaDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.
Manimaran RamaniDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.
Ranjit KumarDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.
Landon WilsonTargeted Metabolomics and Proteomics Laboratory, University of Alabama , Birmingham, Alabama.
Zubair AghaiDepartment of Pediatrics, Thomas Jefferson University/Nemours , Philadelphia, Pennsylvania.
Stephen BarnesTargeted Metabolomics and Proteomics Laboratory, University of Alabama , Birmingham, Alabama.
J Edwin BlalockDivision of Pulmonary, Allergy and Critical Care Medicine, University of Alabama , Birmingham, Alabama.
Amit GaggarDivision of Pulmonary, Allergy and Critical Care Medicine, University of Alabama , Birmingham, Alabama.
Vineet BhandariDepartment of Pediatrics, Drexel University , Philadelphia, Pennsylvania.
Namasivayam AmbalavananDepartment of Pediatrics, University of Alabama , Birmingham, Alabama.
University of Alabama at Birmingham · USTarget (United States) · USDrexel University · USThomas Jefferson University · US

Funding

STOP BPDR01HL129907 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AMBALAVANAN, NAMASIVAYAM · 2015 to 2017
$1.1M
Mechanisms of Pulmonary Microbiota-Induced Inflammation and Vascular Dysfunction in Neonatal Lung InjuryK08HL141652 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LAL, CHARITHARTH VIVEK · 2019 to 2023
$838k
6 · The paper itself

Abstract

The pathogenesis of bronchopulmonary dysplasia (BPD) is not well understood. We previously identified differences in the airway microbiome at birth between preterm infants who were BPD predisposed versus those who were BPD resistant. In this study, we attempted to identify mechanisms by which the airway microbiome could modify the risk for BPD. We used a software-based method to predict the metagenome of the tracheal aspirate (TA) microbiome from 16S rRNA sequencing data in preterm infants and to identify functional ortholog genes that were differentially abundant in BPD-predisposed and BPD-resistant infants. We also identified metabolites that were differentially enriched in these samples by use of untargeted mass spectrometry and mummichog to identify the metabolic pathways involved. Microbial metagenome analysis identified specific pathways that were less abundant in the functional metagenome of the microbiota of BPD-predisposed infants compared with BPD-resistant infants. The airway metabolome of BPD-predisposed infants was enriched for metabolites involved in fatty acid activation and androgen and estrogen biosynthesis compared with BPD-resistant infants. These findings suggest that in extremely preterm infants the early airway microbiome may alter the metabolome, thereby modifying the risk of BPD. The differential enrichment of sex steroid metabolic pathways supports previous studies suggesting a role for sexual dimorphism in BPD risk. This study also suggests a role for metabolomic and metagenomic profiles to serve as early biomarkers of BPD risk.

Indexed as

BiomarkersBronchopulmonary DysplasiaGestational AgeHumansInfant, NewbornInfant, PrematureMetabolic Networks and PathwaysMetabolomeMetabolomicsMetagenomeMicrobiotaRNA, Ribosomal, 16STracheaBiomarkersRNA, Ribosomal, 16Sairway metabolomicsbiomarkers of BPDbronchopulmonary dysplasiametabolomics and metagenomicsmicrobiome

Identifiers

PMID30113227
PMCPMC6295508
OpenAlexW2885436237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.