Evidence map›Paper›PMID 30111831›Full record

ArticleScientific reports2018

Subcellular Peptide Localization in Single Identified Neurons by Capillary Microsampling Mass Spectrometry.

Linwen Zhang, Nikkita Khattar, Ildiko Kemenes, Gyorgy Kemenes, Zita Zrinyi, Zsolt Pirger, Akos Vertes

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

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  14. Neuropeptide Localization inFrontiers in molecular neuroscience · 2021
    Review
  15. Article
  16. Introducing charge tagChemical science · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Linwen ZhangDepartment of Chemistry, The George Washington University, Washington, DC, 20052, USA.
Nikkita KhattarDepartment of Chemistry, The George Washington University, Washington, DC, 20052, USA.
Ildiko KemenesSussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK.
Gyorgy KemenesSussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK.ORCID 0000-0003-2004-8725
Zita ZrinyiDepartment of Experimental Zoology, Balaton Limnological Institute, MTA Center for Ecological Research, 8237, Tihany, Hungary.
Zsolt PirgerDepartment of Experimental Zoology, Balaton Limnological Institute, MTA Center for Ecological Research, 8237, Tihany, Hungary.
Akos VertesDepartment of Chemistry, The George Washington University, Washington, DC, 20052, USA. vertes@gwu.edu.ORCID 0000-0001-5186-5352
George Washington University · USHUN-REN Balaton Limnological Research Institute · HUUniversity of Sussex · GB

Funding

DOD | Defense Advanced Research Projects Agency (DARPA) W911NF-14-2-0020Magyar Tudományos Akadémia (Hungarian Academy of Sciences) 2017-1.2.1-NKP-2017-00002
6 · The paper itself

Abstract

Single cell mass spectrometry (MS) is uniquely positioned for the sequencing and identification of peptides in rare cells. Small peptides can take on different roles in subcellular compartments. Whereas some peptides serve as neurotransmitters in the cytoplasm, they can also function as transcription factors in the nucleus. Thus, there is a need to analyze the subcellular peptide compositions in identified single cells. Here, we apply capillary microsampling MS with ion mobility separation for the sequencing of peptides in single neurons of the mollusk Lymnaea stagnalis, and the analysis of peptide distributions between the cytoplasm and nucleus of identified single neurons that are known to express cardioactive Phe-Met-Arg-Phe amide-like (FMRFamide-like) neuropeptides. Nuclei and cytoplasm of Type 1 and Type 2 F group (Fgp) neurons were analyzed for neuropeptides cleaved from the protein precursors encoded by alternative splicing products of the FMRFamide gene. Relative abundances of nine neuropeptides were determined in the cytoplasm. The nuclei contained six of these peptides at different abundances. Enabled by its relative enrichment in Fgp neurons, a new 28-residue neuropeptide was sequenced by tandem MS.

Indexed as

Amino Acid SequenceAnimalsFMRFamideInterneuronsIntracellular SpaceLymnaeaMass SpectrometryNeuronsNeuropeptidesNeurotransmitter AgentsPeptidesSingle-Cell AnalysisSubcellular FractionsFMRFamideNeuropeptidesNeurotransmitter AgentsPeptides

Identifiers

PMID30111831
PMCPMC6093924
OpenAlexW2885523630

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.