Evidence map›Paper›PMID 30111654›Full record

ArticleDevelopment (Cambridge, England)2018

Nodal signaling has dual roles in fate specification and directed migration during germ layer segregation in zebrafish.

Zairan Liu, Stephanie Woo, Orion D Weiner

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Optogenetic control of Nodal signaling patterns.Development (Cambridge, England) · 2025
    Article
  6. Article
  7. Optogenetic control of Nodal signaling patterns.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Zairan LiuCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158, USA.
Stephanie WooDepartment of Molecular Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA.
Orion D WeinerCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158, USA orion.weiner@ucsf.edu.ORCID 0000-0002-1778-6543
University of California, San Francisco · USUniversity of California, Merced · US

Funding

Cellular Decision Making Diversity SupplementR35GM118167 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Orion D Weiner · 2016 to 2026
$10.3M
Cell biological mechanisms of gastrointestinal tract formationK01DK092312 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WOO, STEPHANIE · 2011 to 2015
$444k
In vivo analysis of gastrointestinal epithelium morphogenesisR03DK106358 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WOO, STEPHANIE · 2015 to 2016
$158k
NIDDK NIH HHS K01 DK092312NIDDK NIH HHS R03 DK106358NIGMS NIH HHS R35 GM118167
6 · The paper itself

Abstract

During gastrulation, endodermal cells actively migrate to the interior of the embryo, but the signals that initiate and coordinate this migration are poorly understood. By transplanting ectopically induced endodermal cells far from the normal location of endoderm specification, we identified the inputs that drive internalization without the confounding influences of fate specification and global morphogenic movements. We find that Nodal signaling triggers an autocrine circuit for initiating endodermal internalization. Activation of the Nodal receptor directs endodermal specification through

Indexed as

AnimalsCell MovementEndodermGastrulationGene Expression Regulation, DevelopmentalGerm LayersNodal ProteinSOX Transcription FactorsTransforming Growth Factor betaZebrafishZebrafish ProteinsNodal Proteinsox32 protein, zebrafishSOX Transcription FactorsTransforming Growth Factor betaZebrafish ProteinsEndodermGerm layer segregationIngressionNodal signalingZebrafish gastrulation

Identifiers

PMID30111654
PMCPMC6141772
OpenAlexW2887081155

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.