Evidence map›Paper›PMID 30111537›Full record

ArticleThe EMBO journal2018

Error-free DNA damage tolerance pathway is facilitated by the Irc5 translocase through cohesin.

Ireneusz Litwin, Tomasz Bakowski, Barnabas Szakal, Ewa Pilarczyk, Ewa Maciaszczyk-Dziubinska, Dana Branzei, Robert Wysocki

Abstract read
In one paragraph

Article in The EMBO journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Chemical Insights into Oxidative and Nitrative Modifications of DNA.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ireneusz LitwinInstitute of Experimental Biology, University of Wroclaw, Wroclaw, Poland ireneusz.litwin@uwr.edu.pl.ORCID 0000-0002-2764-0708
Tomasz BakowskiInstitute of Experimental Biology, University of Wroclaw, Wroclaw, Poland.
Barnabas SzakalFondazione Istituto FIRC di Oncologia Molecolare (IFOM), Milan, Italy.
Ewa PilarczykInstitute of Experimental Biology, University of Wroclaw, Wroclaw, Poland.
Ewa Maciaszczyk-DziubinskaInstitute of Experimental Biology, University of Wroclaw, Wroclaw, Poland.
Dana BranzeiFondazione Istituto FIRC di Oncologia Molecolare (IFOM), Milan, Italy.ORCID 0000-0002-0544-4888
Robert WysockiInstitute of Experimental Biology, University of Wroclaw, Wroclaw, Poland.ORCID 0000-0002-3274-2629

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA damage tolerance (DDT) mechanisms facilitate replication resumption and completion when DNA replication is blocked by bulky DNA lesions. In budding yeast, template switching (TS) via the Rad18/Rad5 pathway is a favored DDT pathway that involves usage of the sister chromatid as a template to bypass DNA lesions in an error-free recombination-like process. Here, we establish that the Snf2 family translocase Irc5 is a novel factor that promotes TS and averts single-stranded DNA persistence during replication. We demonstrate that, during replication stress, Irc5 enables replication progression by assisting enrichment of cohesin complexes, recruited in an Scc2/Scc4-dependent fashion, near blocked replication forks. This allows efficient formation of sister chromatid junctions that are crucial for error-free DNA lesion bypass. Our results support the notion of a key role of cohesin in the completion of DNA synthesis under replication stress and reveal that the Rad18/Rad5-mediated DDT pathway is linked to cohesin enrichment at sites of perturbed replication via the Snf2 family translocase Irc5.

Indexed as

DNA DamageDNA ReplicationCell Cycle ProteinsCell-Free SystemChromatidsChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsDNA, FungalDNA HelicasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsDNA, FungalDNA HelicasesRAD18 protein, S cerevisiaeRAD5 protein, S cerevisiaeSaccharomyces cerevisiae Proteinscohesincohesin loadingDNA damage tolerancereplication stresstemplate switching

Identifiers

PMID30111537
PMCPMC6138436

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.