Evidence map›Paper›PMID 30111536›Full record

ArticleThe EMBO journal2018

DCAF13 promotes pluripotency by negatively regulating SUV39H1 stability during early embryonic development.

Yin-Li Zhang, Long-Wen Zhao, Jue Zhang, Rongrong Le, Shu-Yan Ji, Chuan Chen, Yawei Gao, Dali Li, Shaorong Gao, Heng-Yu Fan

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 72 citations in OpenAlex.

  1. DCAF13 Safeguards Hematopoietic Stem Cells via RRS1-Regulated Ribosome Biogenesis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Clocks and Dominoes: Timing Mechanisms of Embryogenesis.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Degrons: defining the rules of protein degradation.Nature reviews. Molecular cell biology · 2025
    Review
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  8. Article
  9. Functional Characterization and Heterogeneity Analysis of Ribosomal Proteins in Mouse Preimplantation Embryos.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
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  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
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  19. Article
  20. CRL4Cellular and molecular life sciences : CMLS · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Yin-Li ZhangLife Sciences Institute, Zhejiang University, Hangzhou, China.ORCID 0000-0001-8353-9615
Long-Wen ZhaoLife Sciences Institute, Zhejiang University, Hangzhou, China.ORCID 0000-0002-4964-9578
Jue ZhangLife Sciences Institute, Zhejiang University, Hangzhou, China.ORCID 0000-0001-5742-1277
Rongrong LeClinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China.
Shu-Yan JiLife Sciences Institute, Zhejiang University, Hangzhou, China.
Chuan ChenClinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China.
Yawei GaoClinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China.
Dali LiShanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences and School of Life Sciences, East China Normal University, Shanghai, China.
Shaorong GaoClinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, China.
Heng-Yu FanLife Sciences Institute, Zhejiang University, Hangzhou, China hyfan@zju.edu.cn.ORCID 0000-0003-4544-4724
Shanghai First Maternity and Infant Hospital · CNZhejiang University · CNEast China Normal University · CNSir Run Run Shaw Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian oocytes and zygotes have the unique ability to reprogram a somatic cell nucleus into a totipotent state. SUV39H1/2-mediated histone H3 lysine-9 trimethylation (H3K9me3) is a major barrier to efficient reprogramming. How SUV39H1/2 activities are regulated in early embryos and during generation of induced pluripotent stem cells (iPSCs) remains unclear. Since expression of the CRL4 E3 ubiquitin ligase in oocytes is crucial for female fertility, we analyzed putative CRL4 adaptors (DCAFs) and identified DCAF13 as a novel CRL4 adaptor that is essential for preimplantation embryonic development. Dcaf13 is expressed from eight-cell to morula stages in both murine and human embryos, and Dcaf13 knockout in mice causes preimplantation-stage mortality. Dcaf13 knockout embryos are arrested at the eight- to sixteen-cell stage before compaction, and this arrest is accompanied by high levels of H3K9me3. Mechanistically, CRL4-DCAF13 targets SUV39H1 for polyubiquitination and proteasomal degradation and therefore facilitates H3K9me3 removal and zygotic gene expression. Taken together, CRL4-DCAF13-mediated SUV39H1 degradation is an essential step for progressive genome reprogramming during preimplantation embryonic development.

Indexed as

Embryonic DevelopmentGene Expression Regulation, DevelopmentalAnimalsBlastocystEnzyme StabilityHistonesInduced Pluripotent Stem CellsMethyltransferasesMiceMice, Inbred ICRMice, KnockoutOocytesProteolysisRepressor ProteinsRNA-Binding ProteinsUbiquitinationCRL4 E3 ubiquitin ligase complex, mouseHistonesMethyltransferasesRepressor ProteinsRNA-Binding ProteinsSuv39h1 protein, mouseUbiquitin-Protein Ligase Complexeshistone methylationmaternal–zygotic transitionpreimplantation embryosprotein ubiquitinationzygote

Identifiers

PMID30111536
PMCPMC6138440
OpenAlexW2885547929

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.