Evidence map›Paper›PMID 30111285›Full record

ArticleBMC plant biology2018

Fine analysis of a genomic region involved in resistance to Mediterranean corn borer.

José Cruz Jiménez-Galindo, Rosa Ana Malvar, Ana Butrón, Marlon Caicedo, Bernardo Ordás

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 5 countries.

José Cruz Jiménez-GalindoMisión Biológica de Galicia, Spanish National Research Council (CSIC), Apartado 28, 36080, Pontevedra, Spain. jimenez.cruz@inifap.gob.mx.ORCID http://orcid.org/0000-0002-7543-444X
Rosa Ana MalvarMisión Biológica de Galicia, Spanish National Research Council (CSIC), Apartado 28, 36080, Pontevedra, Spain.
Ana ButrónMisión Biológica de Galicia, Spanish National Research Council (CSIC), Apartado 28, 36080, Pontevedra, Spain.
Marlon CaicedoMisión Biológica de Galicia, Spanish National Research Council (CSIC), Apartado 28, 36080, Pontevedra, Spain.
Bernardo OrdásMisión Biológica de Galicia, Spanish National Research Council (CSIC), Apartado 28, 36080, Pontevedra, Spain.
Consejo Superior de Investigaciones Científicas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSesamia nonagrioides Lefebvere (Mediterranean corn borer, MCB) is the main pest of maize in the Mediterranean area. QTL for MCB stalk tunneling and grain yield under high MCB infestation had been located at bin 8.03-8.05 (4-21 cM and 10-30 cM respectively) in a previous analysis of the EP42 x EP39 RILs mapping population. The objective of the present work was to study with higher resolution those QTL, and validating and estimating with higher precision their locations and effects. To achieve this objective, we developed a set of 38 heterogeneous inbred families (HIFs) which were near-homozygous in the genome, except in the region under study. The HIFs were evaluated in multiple environments under artificial infestation with MCB and genotyped with SNPs.

resultsThe QTL for grain yield under high infestation was confirmed with higher precision and improved reliability at 112.6-116.9 Mb. On the contrary, the location of the QTL for stalk tunneling was not validated probably due to the fixation of some genomic regions during the development of the HIFs. Our study confirmed that the co-localization of the QTL for stalk tunneling and grain yield in the previous study was due to linked genes, not to pleiotropic effects. So, the QTL for grain yield can be used for improving grain yield without undesirable effect on stalk tunneling.

conclusionsThe HIF analysis is useful for validating QTL and for conducting deeper studies in traits related to corn borer resistance.

Indexed as

AntibiosisGenome, PlantHerbivoryQuantitative Trait LociAnimalsChromosome MappingFlowersLarvaMothsPlant StemsSeedsZea maysHeterogeneous inbred families (HIFs)Insect resistanceNear-isogenic linesQuantitative trait lociSesamia nonagrioidesZea mays

Identifiers

PMID30111285
PMCPMC6094900
OpenAlexW2887387327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.