Evidence map›Paper›PMID 30110957›Full record

ArticleInternational journal of molecular sciences2018

Comprehensive Analysis of Codon Usage on Rabies Virus and Other Lyssaviruses.

Xu Zhang, Yuchen Cai, Xiaofeng Zhai, Jie Liu, Wen Zhao, Senlin Ji, Shuo Su, Jiyong Zhou

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Codon usage bias analysis of theFrontiers in genetics · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xu ZhangMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. 2017207021@njau.com.
Yuchen CaiMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. caiyuchen1114@gmail.com.
Xiaofeng ZhaiMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. 18851175127@163.com.
Jie LiuMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. 2016107063@njau.edu.cn.
Wen ZhaoMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. 2017207031@njau.edu.cn.
Senlin JiMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. senlinji@163.com.
Shuo SuMOE International Joint Collaborative Research Laboratory for Animal Health & Food Safety, Institute of Immunology and College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China. shuosu@njau.edu.cn.
Jiyong ZhouKey Laboratory of Animal Virology of Ministry of Agriculture, Department of Veterinary Medicine, Zhejiang University, Hangzhou 310058, China. jyzhou@zju.edu.cn.
Nanjing Agricultural University · CNZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rabies virus (RABV) and other lyssaviruses can cause rabies and rabies-like diseases, which are a persistent public health threat to humans and other mammals. Lyssaviruses exhibit distinct characteristics in terms of geographical distribution and host specificity, indicative of a long-standing diversification to adapt to the environment. However, the evolutionary diversity of lyssaviruses, in terms of codon usage, is still unclear. We found that RABV has the lowest codon usage bias among lyssaviruses strains, evidenced by its high mean effective number of codons (ENC) (53.84 ± 0.35). Moreover, natural selection is the driving force in shaping the codon usage pattern of these strains. In summary, our study sheds light on the codon usage patterns of lyssaviruses, which can aid in the development of control strategies and experimental research.

Indexed as

CodonEvolution, MolecularSelection, GeneticAnimalsHumansRabies virusCodoncodon usage biaslyssavirusesnatural selectionRABV

Identifiers

PMID30110957
PMCPMC6121662
OpenAlexW2886112261

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.