Evidence map›Paper›PMID 30110897›Full record

ReviewInternational journal of molecular sciences2018

Single-Strand Break End Resection in Genome Integrity: Mechanism and Regulation by APE2.

Md Akram Hossain, Yunfeng Lin, Shan Yan

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 75 citations in OpenAlex.

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  15. Base Excision DNA Repair in Plants:International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Md Akram HossainDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA. mhossai5@uncc.edu.
Yunfeng LinDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA. ylin42@uncc.edu.
Shan YanDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA. shan.yan@uncc.edu.
University of North Carolina at Charlotte · US

Funding

Mechanism of APE1 in DNA damage responseR01CA225637 · NCI · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2018 to 2022
$1.9M
Role of APE2 in DNA damage responseR15GM114713 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2015 to 2015
$363k
Role of TopBP1 partner WDR18 in DNA damage checkpoint and DNA replicationR15GM101571 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2012 to 2012
$297k
NCI NIH HHS R01 CA225637NIGMS NIH HHS R15 GM101571NIGMS NIH HHS R15 GM114713
6 · The paper itself

Abstract

DNA single-strand breaks (SSBs) occur more than 10,000 times per mammalian cell each day, representing the most common type of DNA damage. Unrepaired SSBs compromise DNA replication and transcription programs, leading to genome instability. Unrepaired SSBs are associated with diseases such as cancer and neurodegenerative disorders. Although canonical SSB repair pathway is activated to repair most SSBs, it remains unclear whether and how unrepaired SSBs are sensed and signaled. In this review, we propose a new concept of SSB end resection for genome integrity. We propose a four-step mechanism of SSB end resection: SSB end sensing and processing, as well as initiation, continuation, and termination of SSB end resection. We also compare different mechanisms of SSB end resection and DSB end resection in DNA repair and DNA damage response (DDR) pathways. We further discuss how SSB end resection contributes to SSB signaling and repair. We focus on the mechanism and regulation by APE2 in SSB end resection in genome integrity. Finally, we identify areas of future study that may help us gain further mechanistic insight into the process of SSB end resection. Overall, this review provides the first comprehensive perspective on SSB end resection in genome integrity.

Indexed as

DNA Breaks, Single-StrandedDNA RepairGenomic InstabilitySignal TransductionAnimalsDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesHumansMultifunctional EnzymesAPEX2 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesMultifunctional EnzymesAPE2ATR-Chk1 DDR pathwayGenome integritySSB end resectionSSB repairSSB signaling

Identifiers

PMID30110897
PMCPMC6122073
OpenAlexW2886187696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.