Evidence map›Paper›PMID 30110611›Full record

ArticleJournal of theoretical biology2018

The origin and early evolution of life in chemical composition space.

David A Baum

Abstract read
In one paragraph

Article in Journal of theoretical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. The challenge of distinguishing living from non-living entities.Theory in biosciences = Theorie in den Biowissenschaften · 2026
    Review
  2. Evolution from Composome to RNA Replicase.Life (Basel, Switzerland) · 2026
    Review
  3. Article
  4. Why cellular computations challenge our design principles.Seminars in cell & developmental biology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Enhancement of Prebiotic Peptide Formation in Cyclic Environments.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2023
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. An evolutionary process without variation and selection.Journal of the Royal Society, Interface · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

David A BaumDepartment of Botany and the Wisconsin Institute for Discovery, University of Wisconsin, Madison, WI 53706, USA. Electronic address: dbaum@wisc.edu.

Funding

Shared Services Center NASA 80NSSC17K0296
6 · The paper itself

Abstract

Life can be viewed as a localized chemical system that sits in the basin of attraction of a metastable dynamical attractor state that remains out of equilibrium with the environment. To explore the implications of this conception, I introduce an abstract coordinate system, chemical composition (CC Space), which summarizes the degree to which chemical systems are out of equilibrium with the bulk environment. A system's chemical disequilibrium (CD) is defined to be proportional to the Euclidean distance between the composition of a small region of physical space, a pixel, and the origin of CC space. Such a model implies that new living states arise through chance changes in local chemical concentration ("mutations") that cause chemical systems to move in CC space and enter the basin of attraction of a life state. The attractor of a life state comprises an autocatalytic set of chemicals whose essential ("keystone") species are produced at a higher rate than they are lost to the environment by diffusion, such that spatial growth of the life state is expected. This framework suggests that new life states are most likely to form at the interface between different physical phases, where the rate of diffusion of keystone species is tied to the low-diffusion regime, whereas food and waste products are subject to the more diffusive regime. Once life nucleates, for example on a mineral surface, it will tend to grow and generate variants as a result of additional mutations that find alternative life states. By jumping from life state to life state, systems can eventually occupy areas of CC space that are too far out of equilibrium with the environment to ever arise in a single mutational step. Furthermore, I propose that variation in the capacity of different surface associated life states to persist and compete may systematically favor states that have higher chemical disequilibrium. The model also suggests a simple and predictable path from surface-associated life to cell-like individuation. This dynamical systems theoretical framework provides an integrated view of the origin and early evolution of life and supports novel empirical approaches.

Indexed as

Evolution, ChemicalModels, ChemicalOrigin of LifeDiffusionStochastic ProcessesSystems BiologyAnalog inheritanceCompartmentalizationComplexificationDissipative structuresDynamical systemsEntropyNeighborhood selectionOrigin of lifeOrigin of protocellsSurface metabolism

Identifiers

PMID30110611
PMCPMC6132054

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.