Evidence map›Paper›PMID 30109002›Full record

ArticleMedChemComm2018

Targeting miRNA by tunable small molecule binders: peptidic aminosugar mediated interference in miR-21 biogenesis reverts epithelial to mesenchymal transition.

Arpita Ghosh, Natalya Degyatoreva, Casey Kukielski, Sandra Story, Sayantan Bhaduri, Krishnagopal Maiti, Smita Nahar, Arjun Ray, Dev P Arya, Souvik Maiti

Open access · bronzeAbstract read
In one paragraph

Article in MedChemComm, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. The Role of MiRNA in Cancer: Pathogenesis, Diagnosis, and Treatment.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Review
  8. Drugging the "undruggable" microRNAs.Cellular and molecular life sciences : CMLS · 2021
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Arpita GhoshCSIR, Institute of Genomics and Integrative Biology , New Delhi , India . Email: souvik@igib.res.in.
Natalya DegyatorevaNUBAD LLC , 900 B West Faris Road , Greenville , SC 29605 , USA.
Casey KukielskiLaboratory of Medicinal Chemistry , Clemson University , Clemson , SC 29634 , USA . Email: dparya@clemson.edu.
Sandra StoryNUBAD LLC , 900 B West Faris Road , Greenville , SC 29605 , USA.
Sayantan BhaduriNUBAD LLC , 900 B West Faris Road , Greenville , SC 29605 , USA.
Krishnagopal MaitiLaboratory of Medicinal Chemistry , Clemson University , Clemson , SC 29634 , USA . Email: dparya@clemson.edu.
Smita NaharCSIR, Institute of Genomics and Integrative Biology , New Delhi , India . Email: souvik@igib.res.in.
Arjun RayCSIR, Institute of Genomics and Integrative Biology , New Delhi , India . Email: souvik@igib.res.in.
Dev P AryaNUBAD LLC , 900 B West Faris Road , Greenville , SC 29605 , USA.ORCID 0000-0001-5873-1066
Souvik MaitiCSIR, Institute of Genomics and Integrative Biology , New Delhi , India . Email: souvik@igib.res.in.ORCID 0000-0001-9897-1419
Greenville College · USInstitute of Genomics and Integrative Biology · INMedicina · PL

Funding

A Rapid assay for RNA targeted drugs: Instrumentation SupplementR42GM097917 · NIGMS · NUBAD, LLC · PI ARYA, DEV PRIYA · 2014 to 2015
$1.4M
Development of Aminoglycoside-Nucleic Acid Conjugates for Inactivation of an Antibiotic Resistance-Conferring Aminoglycoside Sensing RiboswitchR43AI118110 · NIAID · NUBAD, LLC · PI STORY, SANDRA PAIGE · 2015 to 2016
$464k
Targeting RNA conformation for drug developmentR41GM100607 · NIGMS · NUBAD, LLC · PI ARYA, DEV PRIYA · 2012 to 2012
$295k
A novel assay for RNA targeted drugsR41GM097917 · NIGMS · NUBAD, LLC · PI ARYA, DEV PRIYA · 2011 to 2011
$286k
NIAID NIH HHS R43 AI118110NIGMS NIH HHS R41 GM097917NIGMS NIH HHS R41 GM100607NIGMS NIH HHS R42 GM097917
6 · The paper itself

Abstract

Epithelial to mesenchymal transition (EMT) is a process in which epithelial cells lose cell polarity and cell-cell adhesion and gain migratory and invasive properties to become mesenchymal cells that are very vital for development, wound healing and stem cell behavior and contribute pathologically to fibrosis and cancer progression. miR21, a potent regulator of the tumor suppressor gene PTEN, can be silenced to reverse EMT, thereby providing an attractive target for abrogating the malignant behavior of breast cancer. Here, we report the design, synthesis and binding of a peptidic-aminoglycoside (PA) based chemical library against pre-miR21 that led to the identification of a group of small molecules that bind to pre-miR21 with high affinities and antagonize miR-21 maturation and function, thereby reversing EMT. The approach described here offers a promising miRNA targeting platform where such aminosugar conjugates can be similarly used to target other oncogenic miRNAs. Minor changes in the amino acid sequence allow us to tailor the binding effectiveness and downstream biological effects, thus making this approach a potentially tunable method of regulation of miRNA function.

Identifiers

PMID30109002
PMCPMC6072456
OpenAlexW2808086352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.