Evidence map›Paper›PMID 30108795›Full record

ArticleMedChemComm2017

Quantitative measurement of intracellular HDAC1/2 drug occupancy using a

Hua Xu, Lee R Roberts, Song Chou, Betsy Pierce, Arjun Narayanan, Lyn H Jones

Open access · bronzeAbstract read
In one paragraph

Article in MedChemComm, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Hua XuPfizer Inc. Medicine Design , 610 Main Street , Cambridge , MA 02135 , USA . Email: Hua.Xu@pfizer.com.ORCID 0000-0002-3510-7874
Lee R RobertsPfizer Inc. Medicine Design , 610 Main Street , Cambridge , MA 02135 , USA . Email: Hua.Xu@pfizer.com.
Song ChouPfizer Inc. Rare Diseases Research Unit , 610 Main Street , Cambridge , MA 02135 , USA.
Betsy PiercePfizer Inc. Medicine Design , Eastern Point Road , Groton , CT 06340 , USA.
Arjun NarayananPfizer Inc. Medicine Design , 610 Main Street , Cambridge , MA 02135 , USA . Email: Hua.Xu@pfizer.com.
Lyn H JonesPfizer Inc. Medicine Design , 610 Main Street , Cambridge , MA 02135 , USA . Email: Hua.Xu@pfizer.com.
Pfizer (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone deacetylases (HDACs) regulate diverse cellular processes, and are promising targets for a number of diseases. Here we describe the design and utilization of a largazole-based chemical probe to quantitatively measure the intracellular occupancy of HDAC1 and HDAC2 by dacinostat. Surprisingly, the probe was unable to enrich HDAC3 despite its nanomolar potency in a biochemical assay, further proving the necessity of cell-based target occupancy assays to understand compound potency in physiologically-relevant settings. This occupancy assay has the potential to aid the development of novel HDAC1/2 inhibitors in drug discovery.

Identifiers

PMID30108795
PMCPMC6072125
OpenAlexW2569679219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.