Evidence map›Paper›PMID 30108283›Full record

ArticleEuropean journal of human genetics : EJHG2018

A study of Kibbutzim in Israel reveals risk factors for cardiometabolic traits and subtle population structure.

Einat Granot-Hershkovitz, David Karasik, Yechiel Friedlander, Laura Rodriguez-Murillo, Rajkumar Dorajoo, Jianjun Liu, Anshuman Sewda, Inga Peter, Shai Carmi, Hagit Hochner

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Einat Granot-HershkovitzBraun School of Public Health, Hebrew University-Hadassah Medical Center, Jerusalem, Israel.
David KarasikFaculty of Medicine in the Galilee, Bar-Ilan University, Safed, Israel.
Yechiel FriedlanderBraun School of Public Health, Hebrew University-Hadassah Medical Center, Jerusalem, Israel.
Laura Rodriguez-MurilloDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Rajkumar DorajooGenome Institute of Singapore, Agency for Science, Technology and Research, Singapore, Singapore.ORCID http://orcid.org/0000-0001-6608-2051
Jianjun LiuGenome Institute of Singapore, Agency for Science, Technology and Research, Singapore, Singapore.
Anshuman SewdaDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-2272-5382
Inga PeterDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Shai CarmiBraun School of Public Health, Hebrew University-Hadassah Medical Center, Jerusalem, Israel. shai.carmi@mail.huji.ac.il.
Hagit HochnerBraun School of Public Health, Hebrew University-Hadassah Medical Center, Jerusalem, Israel. hagith@ekmd.huji.ac.il.

Funding

Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
Maternal Obesity, Fetal Genomics, and Atherosclerotic Metabolic RiskR01HL088884 · NHLBI · UNIVERSITY OF WASHINGTON · PI SISCOVICK, DAVID STUART · 2006 to 2009
$1.7M
NHLBI NIH HHS R01 HL088884NIH HHS S10 OD018522
6 · The paper itself

Abstract

Genetic studies in isolated populations often increase power for identifying loci associated with complex diseases and traits. We present here the Kibbutzim Family Study (KFS), aimed at investigating the genetic basis of cardiometabolic traits in extended Israeli families characterized by long-term social stability and a homogeneous environment. Extensive information on cardiometabolic traits, as well as genome-wide genotypes, were collected on 901 individuals. We observed that most KFS participants were of Ashkenazi Jewish (AJ) genetic origin, confirmed a recent severe bottleneck in the AJ recent history, and detected a subtle within-AJ population structure. Focusing on genetic variants relatively common in the KFS but very rare in Europeans, we observed that AJ-enriched variants appear in cancer-related pathways more than expected by chance. We conducted an association study of the AJ-enriched variants against 16 cardiometabolic traits, and found seven loci (24 variants) to be significantly associated. The strongest association, which we also replicated in an independent study, was between a variant upstream of MSRA (frequency ≈1% in the KFS and nearly absent in Europeans) and weight (P = 3.6∙10

Indexed as

Gene FrequencyCardiovascular DiseasesFemaleGenetic Predisposition to DiseaseHumansIsraelJewsMaleMetabolic SyndromeMethionine Sulfoxide ReductasesPedigreePolymorphism, GeneticRural Populationmethionine sulfoxide reductaseMethionine Sulfoxide Reductases

Identifiers

PMID30108283
PMCPMC6244281

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.