Evidence map›Paper›PMID 30108156›Full record

ArticleThe oncologist2019

Comprehensive Genomic Profiling of Hodgkin Lymphoma Reveals Recurrently Mutated Genes and Increased Mutation Burden.

Winnie S Liang, Jo-Anne Vergilio, Bodour Salhia, Helen J Huang, Yasuhiro Oki, Ignacio Garrido-Laguna, Haeseong Park, Jason R Westin, Funda Meric-Bernstam, David Fabrizio and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The oncologist, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

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  17. Targeting immune checkpoints in hematological malignancies.Journal of hematology & oncology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Winnie S LiangIntegrated Cancer Genomics Division, Translational Genomics Research Institute, Phoenix, Arizona, USA.
Jo-Anne VergilioFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Bodour SalhiaIntegrated Cancer Genomics Division, Translational Genomics Research Institute, Phoenix, Arizona, USA.
Helen J HuangDepartment of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Yasuhiro OkiDepartment of Lymphoma and Myeloma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Ignacio Garrido-LagunaDepartment of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Haeseong ParkDepartment of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Jason R WestinDepartment of Lymphoma and Myeloma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Funda Meric-BernstamDepartment of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
David FabrizioFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Vincent A MillerFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Philip J StephensFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Michelle A FanaleDepartment of Lymphoma and Myeloma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Jeffrey S RossFoundation Medicine, Inc., Cambridge, Massachusetts, USA.
Filip JankuDepartment of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA fjanku@mdanderson.org.ORCID 0000-0002-8123-4065
The University of Texas MD Anderson Cancer Center · USFoundation Medicine (United States)Translational Genomics Research Institute · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Center for Clinical and Translational Sciences (CCTS)UL1TR000371 · NCATS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MCPHERSON, DAVID D · 2012 to 2016
$13.4M
NCATS NIH HHS UL1 TR000371NCI NIH HHS P30 CA016672
6 · The paper itself

Abstract

backgroundThe genomic landscape of Hodgkin lymphoma (HL) has been difficult to characterize due to the paucity of neoplastic cells and an abundant microenvironment. Such characterization is needed in order to improve treatment strategies. MATERIALS AND

methodsWe performed comprehensive genomic profiling (CGP) using targeted next-generation sequencing on archival formalin-fixed paraffin embedded tumor samples from 63 patients to analyze the landscape of HL.

resultsCGP was successful for 49/63 archival specimens (78%), and revealed aberrations impacting genes including

conclusionThe study demonstrates that comprehensive genomic profiling of archival Hodgkin lymphoma tumor samples is feasible and leads to the identification of genes that are recurrently mutated and that Hodgkin lymphoma has increased mutation burden in the majority of samples analyzed. Furthermore, tracking of IMPLICATIONS FOR PRACTICE: This study provides the first evidence that comprehensive genomic profiling can be performed to map the genomic landscape of Hodgkin lymphoma and that a subpopulation of patients has mutations in

Indexed as

AdultAgedFemaleGene Expression ProfilingGenomicsHodgkin DiseaseHumansMaleMiddle AgedMutationYoung AdultB2M mutationGenomic profilingHodgkin lymphomaTP53 mutationXPO1 mutation

Identifiers

PMID30108156
PMCPMC6369943
OpenAlexW2885743329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.