Evidence map›Paper›PMID 30107725›Full record

ArticleJournal of the American Chemical Society2018

Defining the Determinants of Specificity of Plasmodium Proteasome Inhibitors.

Euna Yoo, Barbara H Stokes, Hanna de Jong, Manu Vanaerschot, Trs Kumar, Nina Lawrence, Mathew Njoroge, Arnold Garcia, Renier Van der Westhuyzen, Jeremiah D Momper and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Review
  3. A recombinant expression system for thebioRxiv : the preprint server for biology · 2025
    Article
  4. Enhancing schistosomiasis drug discovery approaches with optimized proteasome substrates.Protein science : a publication of the Protein Society · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Antimalarial drug discovery: progress and approaches.Nature reviews. Drug discovery · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Structure-Activity Relationship Studies of AntimalarialJournal of medicinal chemistry · 2023
    Article
  19. New targets for antimalarial drug discovery.Current opinion in microbiology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Euna Yoo
Barbara H Stokes
Hanna de Jong
Manu Vanaerschot
Trs Kumar
Nina LawrenceDrug Discovery and Development Centre (H3D) , University of Cape Town , Rondebosch 7701 , South Africa.
Mathew NjorogeDrug Discovery and Development Centre (H3D) , University of Cape Town , Rondebosch 7701 , South Africa.
Arnold GarciaSkaggs School of Pharmacy and Pharmaceutical Sciences , University of California, San Diego , La Jolla , California 92093 , United States.
Renier Van der WesthuyzenDrug Discovery and Development Centre (H3D) , University of Cape Town , Rondebosch 7701 , South Africa.
Jeremiah D MomperSkaggs School of Pharmacy and Pharmaceutical Sciences , University of California, San Diego , La Jolla , California 92093 , United States.
Caroline L NgDepartment of Pathology and Microbiology , University of Nebraska Medical Center , Omaha , Nebraska 68198 , United States.
David A Fidock
Columbia University Irving Medical Center · USStanford University · USUniversity of Cape Town · ZAUniversity of California San Diego · US

Funding

Columbia University Graduate Training Program in Microbiology and ImmunologyT32AI106711 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Nicholas Arpaia, Uttiya Basu · 2014 to 2026
$2.1M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR33AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2019 to 2021
$1.4M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR21AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2017 to 2018
$447k
NIAID NIH HHS R21 AI127581NIAID NIH HHS R33 AI127581NIAID NIH HHS T32 AI106711
6 · The paper itself

Abstract

The Plasmodium proteasome is an emerging antimalarial target due to its essential role in all the major life cycle stages of the parasite and its contribution to the establishment of resistance to artemisinin (ART)-based therapies. However, because of a similarly essential role for the host proteasome, the key property of any antiproteasome therapeutic is selectivity. Several parasite-specific proteasome inhibitors have recently been reported, however, their selectivity must be improved to enable clinical development. Here we describe screening of diverse libraries of non-natural synthetic fluorogenic substrates to identify determinants at multiple positions on the substrate that produce enhanced selectivity. We find that selection of an optimal electrophilic "warhead" is essential to enable high selectivity that is driven by the peptide binding elements on the inhibitor. We also find that host cell toxicity is dictated by the extent of coinhibition of the human β2 and β5 subunits. Using this information, we identify compounds with over 3 orders of magnitude selectivity for the parasite enzyme. Optimization of the pharmacological properties resulted in molecules that retained high potency and selectivity, were soluble, sufficiently metabolically stable and orally bioavailable. These molecules are highly synergistic with ART and can clear parasites in a mouse model of infection, making them promising leads as antimalarial drugs.

Indexed as

ArtemisininsDose-Response Relationship, DrugMolecular StructurePlasmodium falciparumProteasome Endopeptidase ComplexProteasome InhibitorsStructure-Activity RelationshipartemisininArtemisininsProteasome Endopeptidase ComplexProteasome Inhibitors

Identifiers

PMID30107725
PMCPMC6407133
OpenAlexW2886849711

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.