Evidence map›Paper›PMID 30107123›Full record

ArticleJournal of chemical information and modeling2018

Virtual Screening and Experimental Testing of B1 Metallo-β-lactamase Inhibitors.

Joon S Kang, Antonia L Zhang, Mohammad Faheem, Charles J Zhang, Ni Ai, John D Buynak, William J Welsh, Peter Oelschlaeger

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Machine Learning Models Identify Inhibitors of New Delhi Metallo-β-lactamase.Journal of chemical information and modeling · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Considerations and Caveats in Combating ESKAPE Pathogens against Nosocomial Infections.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Joon S KangDepartment of Pharmaceutical Sciences, College of Pharmacy , Western University of Health Sciences , Pomona , California 91766-1854 , United States.
Antonia L ZhangDepartment of Pharmaceutical Sciences, College of Pharmacy , Western University of Health Sciences , Pomona , California 91766-1854 , United States.
Mohammad FaheemDepartment of Pharmaceutical Sciences, College of Pharmacy , Western University of Health Sciences , Pomona , California 91766-1854 , United States.
Charles J ZhangDepartment of Pharmaceutical Sciences, College of Pharmacy , Western University of Health Sciences , Pomona , California 91766-1854 , United States.
Ni AiPharmaceutical Informatics Institute, School of Pharmaceutical Sciences , Zhejiang University , Zhejiang 31005 , People's Republic of China.
John D BuynakDepartment of Chemistry , Southern Methodist University , Dallas , Texas 75275-0314 , United States.
William J WelshDepartment of Pharmacology, Robert Wood Johnson Medical School, Rutgers, and Division of Chem Informatics, Biomedical Informatics Shared Resource, Rutgers-Cancer Institute of New Jersey , The State University of New Jersey , Piscataway , New Jersey 08854-8021 , United States.ORCID 0000-0002-5618-2072
Peter OelschlaegerDepartment of Pharmaceutical Sciences, College of Pharmacy , Western University of Health Sciences , Pomona , California 91766-1854 , United States.ORCID 0000-0001-5949-9297

Funding

Bicyclic beta-Lactam Antibiotics as Poor Substrates for Metallo-beta-lactamasesR15AI109624 · NIAID · SOUTHERN METHODIST UNIVERSITY · PI BUYNAK, JOHN D · 2014 to 2014
$438k
Shape Signatures, an Open Resource for Drug DiscoveryR21GM081394 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI WELSH, WILLIAM J · 2007 to 2008
$429k
NIAID NIH HHS R15 AI109624NIGMS NIH HHS R21 GM081394
6 · The paper itself

Abstract

The global rise of metallo-β-lactamases (MBLs) is problematic due to their ability to inactivate most β-lactam antibiotics. MBL inhibitors that could be coadministered with and restore the efficacy of β-lactams are highly sought after. In this study, we employ virtual screening of candidate MBL inhibitors without thiols or carboxylates to avoid off-target effects using the Avalanche software package, followed by experimental validation of the selected compounds. As target enzymes, we chose the clinically relevant B1 MBLs NDM-1, IMP-1, and VIM-2. Among 32 compounds selected from an approximately 1.5 million compound library, 6 exhibited IC

Indexed as

Anti-Bacterial Agentsbeta-Lactamase Inhibitorsbeta-LactamasesCircular DichroismComputer SimulationDrug Evaluation, PreclinicalEscherichia coliGene Expression Regulation, EnzymologicMass SpectrometryModels, ChemicalMolecular StructureSoftwareAnti-Bacterial Agentsbeta-Lactamase Inhibitorsbeta-Lactamases

Identifiers

PMID30107123
PMCPMC6527342

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.