Evidence map›Paper›PMID 30106992›Full record

ArticlePloS one2018

Morphological and micro-tomographic study on evolution of struvite in synthetic urine infected with bacteria and investigation of its pathological biomineralization.

Muhammed A P Manzoor, Balwant Singh, Ashish K Agrawal, Ananthapadmanabha Bhagwath Arun, M Mujeeburahiman, Punchappady-Devasya Rekha

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Observational
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  12. First Report of Pathogenic BacteriumPathogens (Basel, Switzerland) · 2020
    Article
  13. Microstructural diversity of gallstones revealed by spectral microanalyses and their association with hepatic parameters.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2019
    Article
  14. Article
  15. Characterization of the ϕCTX-likeAccess microbiology · 2019
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Muhammed A P ManzoorYenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, Karnataka, India.
Balwant SinghTechnical Physics Division, Bhabha Atomic Research Centre, Indore-Mumbai, India.
Ashish K AgrawalTechnical Physics Division, Bhabha Atomic Research Centre, Indore-Mumbai, India.
Ananthapadmanabha Bhagwath ArunYenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, Karnataka, India.ORCID 0000-0003-3140-9266
M MujeeburahimanDepartment of Urology, Yenepoya Medical College, Yenepoya (Deemed to be University), Mangalore, Karnataka, India.
Punchappady-Devasya RekhaYenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, Karnataka, India.ORCID 0000-0002-9187-6395
Yenepoya University · INBhabha Atomic Research Centre · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathological biomineralization in the urinary system leads to urolithiasis. Formation of kidney stones involves a series of events during which they undergo morphological and mineralogical changes. We investigated the mineralization of biogenic struvite (in vitro) and examined the transformation of distinct interior and exterior structure of struvite. In vitro crystallization of struvite was performed in the presence of two bacteria that were originally isolated from the kidney stone patients. Morphological evaluation was carried out using SR-μCT as well as FESEM, XRD and FT-IR. Characteristic internal 3-D morphology and porosity of the stones were studied. For comparison, patient derived struvite stones were used. From the results obtained, we report that the presence of bacteria enhances the crystallization process of struvite in vitro. A series of time-resolved experiments revealed that struvite crystals experienced a significant morphologic evolution from pin pointed structure to X-shaped and tabular morphologies. These X-shaped and unusual tabular habits of struvite resembled biogenic morphologies of struvite. SR-μCT showed similarities between the patient derived and the in vitro derived struvite crystals. In conclusion, these experiments revealed that the bacteria play a major role in the specific morphogenesis of struvite and can able to control the nucleation, modulate crystalline phases, and shape of the growing crystal.

Indexed as

Enterobacter cloacaePseudomonas aeruginosaBacterial ProteinsCalcinosisCrystallizationHumansImaging, Three-DimensionalIn Vitro TechniquesPorosityStruviteUreaseUrinary CalculiUrineX-Ray MicrotomographyBacterial ProteinsStruviteUrease

Identifiers

PMID30106992
PMCPMC6091953
OpenAlexW2887309900

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.