Evidence map›Paper›PMID 30105505›Full record

ArticleMicrobial ecology2019

The Hidden World of Rickettsiales Symbionts: "Candidatus Spectririckettsia obscura," a Novel Bacterium Found in Brazilian and Indian Paramecium caudatum.

Michele Castelli, Valentina Serra, Marcus V X Senra, Charan K Basuri, Carlos A G Soares, Sergei I Fokin, Letizia Modeo, Giulio Petroni

Abstract read
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In one paragraph

Article in Microbial ecology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  5. PeerJ · 2020
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  6. Article
  7. The Obligate Symbiont "Frontiers in microbiology · 2020
    Article
  8. Article
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  12. Article
  13. Harmful Effect ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Michele CastelliRomeo and Enrica Invernizzi Pediatric Research Center, Department of Biosciences, University of Milan, Milan, Italy. miccast@tiscali.it.
Valentina SerraDepartment of Biology, University of Pisa, Pisa, Italy.
Marcus V X SenraDepartamento de Genética, Universidade Federal do Rio de Janeiro, UFRJ, Rio de Janeiro, Brazil.
Charan K BasuriDepartment of Zoology, Andhra University, Visakhapatnam, India.
Carlos A G SoaresDepartamento de Genética, Universidade Federal do Rio de Janeiro, UFRJ, Rio de Janeiro, Brazil.
Sergei I FokinDepartment of Biology, University of Pisa, Pisa, Italy.
Letizia ModeoDepartment of Biology, University of Pisa, Pisa, Italy.
Giulio PetroniDepartment of Biology, University of Pisa, Pisa, Italy. giulio.petroni@unipi.it.
University of Pisa · ITUniversidade Federal do Rio de Janeiro · BRAndhra University · INUniversity of Milan · IT

Funding

FP7 People: Marie-Curie Actions 247658Università di Pisa PRA_2016_58
6 · The paper itself

Abstract

Symbioses between bacteria and eukaryotes are widespread and may have significant impact on the evolutionary history of symbiotic partners. The order Rickettsiales is a lineage of intracellular Alphaproteobacteria characterized by an obligate association with a wide range of eukaryotic hosts, including several unicellular organisms, such as ciliates and amoebas. In this work, we characterized the Rickettsiales symbionts associated with two different genotypes of the freshwater ciliate Paramecium caudatum originated from freshwater environments in distant geographical areas. Phylogenetic analyses based on 16S rRNA gene showed that the two symbionts are closely related to each other (99.4% identity), belong to the family Rickettsiaceae, but are far-related with respect to previously characterized Rickettsiales. Consequently, they were assigned to a new species of a novel genus, namely "Candidatus Spectririckettsia obscura." Screening on a database of short reads from 16S rRNA gene amplicon-based profiling studies confirmed that bacterial sequences related to the new symbiont are preferentially retrieved from freshwater environments, apparently with extremely scarce occurrence (< 0.1% positive samples). The present work provides new information on the still under-explored biodiversity of Rickettsiales, in particular those associated to ciliate host cells.

Indexed as

SymbiosisBrazilDNA, BacterialIndiaParamecium caudatumPhylogenyRickettsialesRNA, Ribosomal, 16SDNA, BacterialRNA, Ribosomal, 16SBacterial symbiontIMNGSProtistRickettsiaceae

Identifiers

PMID30105505
OpenAlexW2886882167

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.