Evidence map›Paper›PMID 30104763›Full record

ArticleNature genetics2018

Copy number signatures and mutational processes in ovarian carcinoma.

Geoff Macintyre, Teodora E Goranova, Dilrini De Silva, Darren Ennis, Anna M Piskorz, Matthew Eldridge, Daoud Sie, Liz-Anne Lewsley, Aishah Hanif, Cheryl Wilson and 29 more

Abstract read
In one paragraph

Article in Nature genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 265 papers.

0numbers the graph read from it
0cells of the map it votes in
265citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

265 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Trial
  4. Trial
  5. Ovarian Cancer-SpecificClinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Trial
  6. Trial
  7. Review
  8. HRDetect in Tubo-ovarian Carcinoma: Stratification and Therapeutic Implications.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

205 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

39 authors.

Geoff MacintyreCancer Research UK Cambridge Institute, Cambridge, UK.ORCID http://orcid.org/0000-0003-3906-467X
Teodora E GoranovaCancer Research UK Cambridge Institute, Cambridge, UK.ORCID http://orcid.org/0000-0003-3848-2968
Dilrini De SilvaCancer Research UK Cambridge Institute, Cambridge, UK.
Darren EnnisInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Anna M PiskorzCancer Research UK Cambridge Institute, Cambridge, UK.
Matthew EldridgeCancer Research UK Cambridge Institute, Cambridge, UK.
Daoud SieVU University Medical Center, Amsterdam, the Netherlands.ORCID http://orcid.org/0000-0001-6762-2582
Liz-Anne LewsleyCancer Research UK Clinical Trials Unit, Institute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Aishah HanifCancer Research UK Clinical Trials Unit, Institute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Cheryl WilsonCancer Research UK Clinical Trials Unit, Institute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Suzanne DowsonInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.ORCID http://orcid.org/0000-0003-2511-1965
Rosalind M GlasspoolBeatson West of Scotland Cancer Centre, Glasgow, UK.ORCID http://orcid.org/0000-0002-5000-1680
Michelle LockleyBarts Cancer Institute, Queen Mary University of London, London, UK.
Elly BrockbankBarts Health NHS Trust, London, UK.
Ana MontesGuy's Hospital, London, UK.
Axel WaltherBristol Cancer Institute, Bristol, UK.
Sudha SundarCity Hospital, Birmingham, UK.
Richard EdmondsonDivision of Cancer Sciences, Faculty of Biology, Medicine and Health, University of Manchester, St Mary's Hospital, Manchester, UK.
Geoff D HallSt James's Institute of Oncology, Leeds, UK.
Andrew ClampThe Christie Hospital, Manchester, UK.
Charlie GourleyNicola Murray Centre for Ovarian Cancer Research, MRC IGMM, University of Edinburgh, Edinburgh, UK.
Marcia HallMount Vernon Cancer Centre, Northwood, UK.
Christina FotopoulouDivision of Cancer and Ovarian Cancer Action Research Centre, Department of Surgery and Cancer, Imperial College, London, UK.
Hani GabraDivision of Cancer and Ovarian Cancer Action Research Centre, Department of Surgery and Cancer, Imperial College, London, UK.
James PaulCancer Research UK Clinical Trials Unit, Institute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Anna SupernatCancer Research UK Cambridge Institute, Cambridge, UK.
David MillanDepartment of Pathology, Queen Elizabeth University Hospital, Glasgow, UK.
Aoisha HoyleDepartment of Pathology, Queen Elizabeth University Hospital, Glasgow, UK.
Gareth BrysonDepartment of Pathology, Queen Elizabeth University Hospital, Glasgow, UK.
Craig NourseInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Laura MincarelliInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Luis Navarro SanchezInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Bauke YlstraVU University Medical Center, Amsterdam, the Netherlands.
Mercedes Jimenez-LinanAddenbrooke's Hospital, Cambridge, UK.
Luiza MooreAddenbrooke's Hospital, Cambridge, UK.
Oliver HofmannInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK.
Florian MarkowetzCancer Research UK Cambridge Institute, Cambridge, UK. Florian.Markowetz@cruk.cam.ac.uk.ORCID http://orcid.org/0000-0002-2784-5308
Iain A McNeishInstitute of Cancer Sciences, University of Glasgow, Glasgow, UK. i.mcneish@imperial.ac.uk.ORCID http://orcid.org/0000-0002-9387-7586
James D BrentonCancer Research UK Cambridge Institute, Cambridge, UK. James.Brenton@cruk.cam.ac.uk.ORCID http://orcid.org/0000-0002-5738-6683

Funding

Cancer Research UK 13034Cancer Research UK 15601Cancer Research UK 15973Cancer Research UK 19274Cancer Research UK 19694Cancer Research UK 22905Cancer Research UK A15601Cancer Research UK A15973Cancer Research UK A22905Medical Research Council G0501974Medical Research Council G0601891
6 · The paper itself

Abstract

The genomic complexity of profound copy number aberrations has prevented effective molecular stratification of ovarian cancers. Here, to decode this complexity, we derived copy number signatures from shallow whole-genome sequencing of 117 high-grade serous ovarian cancer (HGSOC) cases, which were validated on 527 independent cases. We show that HGSOC comprises a continuum of genomes shaped by multiple mutational processes that result in known patterns of genomic aberration. Copy number signature exposures at diagnosis predict both overall survival and the probability of platinum-resistant relapse. Measurement of signature exposures provides a rational framework to choose combination treatments that target multiple mutational processes.

Indexed as

DNA Copy Number VariationsMutationAdultAgedAged, 80 and overFemaleGenomicsHumansMiddle AgedNeoplasm Recurrence, LocalOvarian NeoplasmsWhole Genome Sequencing

Identifiers

PMID30104763
PMCPMC6130818

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.