Evidence map›Paper›PMID 30103698›Full record

ArticleBMC infectious diseases2018

Molecular investigation of isolates from a multistate polymicrobial outbreak associated with contaminated total parenteral nutrition in Brazil.

Marcelo Pillonetto, Lavinia Arend, Suzie M T Gomes, Marluce A A Oliveira, Loeci N Timm, Andreza F Martins, Afonso L Barth, Alana Mazzetti, Lena Hersemann, Theo H M Smits and 2 more

Abstract read
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Sepsis caused by twoASM case reports · 2026
    Article
  2. Rhizobium radiobacter pleurisy in a girl: a case report.Journal of medical case reports · 2026
    Article
  3. Emergence of carbapenem-resistantFrontiers in microbiology · 2026
    Article
  4. Article
  5. LysR-type transcriptional regulatorFrontiers in cellular and infection microbiology · 2025
    Article
  6. Regulatory relationships amongFrontiers in microbiology · 2025
    Article
  7. Article
  8. Infection prevention in practice · 2024
    Article
  9. Article
  10. Article
  11. Emergence ofmSphere · 2023
    Article
  12. Antimicrobial stewardship & healthcare epidemiology : ASHE · 2023
    Article
  13. Resolving taxonomic confusion: establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2022
    Review
  14. Carbapenem-resistant IMP-1-producing Pseudocitrobacter vendiensis emerging in a hemodialysis unit.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
  15. Article
  16. Article
  17. Antimicrobial resistance and infection control · 2019
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marcelo PillonettoCore for Advanced Molecular Investigation, Graduate Program in Health Sciences, School of Medicine, Pontifícia Universidade Católica do Paraná, Curitiba, PR, Brazil. m.pilonetto@pucpr.br.
Lavinia ArendCentral Public Health Laboratory - State of Paraná - LACEN/PR, Molecular Bacteriology Division, São José dos Pinhais, PR, Brazil.
Suzie M T GomesBrazilian Health Surveillance Agency - ANVISA, Brasília, DF, Brazil.
Marluce A A OliveiraEzequiel Dias Foundation, Central Public Health Laboratory - State of Minas Gerais, Bacteriology Division, Belo Horizonte, MG, Brazil.
Loeci N TimmCentral Public Health Laboratory - State of Rio Grande do Sul, Bacteriology Division, Porto Alegre, RS, Brazil.
Andreza F MartinsResearch Laboratory on Bacterial Resistance (LABRESIS), Federal University of Rio Grande do Sul, Hospital de Clínicas, Porto Alegre, RS, Brazil.
Afonso L BarthResearch Laboratory on Bacterial Resistance (LABRESIS), Federal University of Rio Grande do Sul, Hospital de Clínicas, Porto Alegre, RS, Brazil.
Alana MazzettiCore for Advanced Molecular Investigation, Graduate Program in Health Sciences, School of Medicine, Pontifícia Universidade Católica do Paraná, Curitiba, PR, Brazil.
Lena HersemannEnvironmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences (IUNR), Zurich University of Applied Sciences ZHAW, Wädenswil, Switzerland.
Theo H M SmitsEnvironmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences (IUNR), Zurich University of Applied Sciences ZHAW, Wädenswil, Switzerland.ORCID 0000-0002-1237-235X
Marcelo T MiraCore for Advanced Molecular Investigation, Graduate Program in Health Sciences, School of Medicine, Pontifícia Universidade Católica do Paraná, Curitiba, PR, Brazil.
Fabio RezzonicoEnvironmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences (IUNR), Zurich University of Applied Sciences ZHAW, Wädenswil, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBetween November 2013 and June 2014, 56 cases of bacteremia (15 deaths) associated with the use of Total Parenteral Nutrition (TPN) and/or calcium gluconate (CG) were reported in four Brazilian states.

methodsWe analyzed 73 bacterial isolates from four states: 45 from blood, 25 from TPN and three from CG, originally identified as Acinetobacter baumannii, Rhizobium radiobacter, Pantoea sp. or Enterobacteriaceae using molecular methods.

resultsThe first two bacterial species were confirmed while the third group of species could not be identified using standard identification protocols. These isolates were subsequently identified by Multi-Locus Sequence Analysis as Phytobacter diazotrophicus, a species related to strains from similar outbreaks in the United States in the 1970's. Within each species, TPN and blood isolates proved to be clonal, whereas the R. radiobacter isolates retrieved from CG were found to be unrelated.

conclusionThis is the first report of a three-species outbreak caused by TPN contaminated with A. baumannii, R. radiobacter and P. diazotrophicus. The concomitant presence of clonal A. baumannii and P. diazotrophicus isolates in several TPN and blood samples, as well as the case of one patient, where all three different species were isolated simultaneously, suggest that the outbreak may be ascribed to a discrete contamination of TPN. In addition, this study highlights the clinical relevance of P. diazotrophicus, which has been involved in outbreaks in the past, but was often misidentified as P. agglomerans.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsAdolescentAdultAgedAgrobacterium tumefaciensBacteremiaBrazilChildChild, PreschoolDisease OutbreaksEnterobacteriaceae InfectionsGram-Negative Bacterial InfectionsHumansInfantInfant, NewbornAcinetobacter baumanniiBacterial identificationPantoeaPhytobacter diazotrophicusRep-PCRRhizobium radiobacterTPN

Identifiers

PMID30103698
PMCPMC6090600

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.