Evidence map›Paper›PMID 30103686›Full record

ArticleBMC infectious diseases2018

Validation of a simplex PCR assay enabling reliable identification of clinically relevant Candida species.

Gabor Fidler, Eva Leiter, Sandor Kocsube, Sandor Biro, Melinda Paholcsek

Open access · goldAbstract readValidation Study
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Nucleic Acid Amplification Tests forPathogens (Basel, Switzerland) · 2026
    Pooled it
  2. Review
  3. Rapid and simple detection ofFrontiers in cellular and infection microbiology · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Identification of Cryptic Species of FourJournal of fungi (Basel, Switzerland) · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Gabor FidlerFaculty of Medicine, Department of Human Genetics, University of Debrecen, Nagyerdei krt. 98, Debrecen, H-4032, Hungary.
Eva LeiterFaculty of Science and Technology, Department of Biotechnology and Microbiology, University of Debrecen, Debrecen, Hungary.
Sandor KocsubeFaculty of Science and Informatics, Department of Microbiology, University of Szeged, Szeged, Hungary.
Sandor BiroFaculty of Medicine, Department of Human Genetics, University of Debrecen, Nagyerdei krt. 98, Debrecen, H-4032, Hungary.
Melinda PaholcsekFaculty of Medicine, Department of Human Genetics, University of Debrecen, Nagyerdei krt. 98, Debrecen, H-4032, Hungary. paholcsek.melinda@med.unideb.hu.ORCID 0000-0001-7171-245X
University of Debrecen · HUUniversity of Szeged · HU

Funding

Szechenyi 2020 GINOP-2.3.2-15-2016-00042
6 · The paper itself

Abstract

backgroundFungal bloodstream infections (BSI) may be serious and are associated with drastic rise in mortality and health care costs. Candida spp. are the predominant etiological agent of fungal sepsis. The prompt and species-level identification of Candida may influence patient outcome and survival. The aim of this study was to develop and evaluate the CanTub-simplex PCR assay coupled with T

methodsEfficiency, coefficient of correlation and the limit of reliable detection were estimated on purified Candida EDTA-whole blood (WB) reference panels seeded with Candida albicans, Candida glabrata, Candida parapsilosis, Candida tropicalis, Candida krusei, Candida guilliermondii, Candida dubliniensis cells in a 6-log range. Discriminatory power was measured on EDTA-WB clinical panels on three different PCR platforms; LightCycler®96, LightCycler® Nano, LightCycler® 2.0. Inter- and intra assay consistencies were also calculated.

resultsThe limit of reliable detection proved to be 0.2-2 genomic equivalent and the method was reliable on broad concentration ranges (10

conclusionOur assay demonstrates recent advances on T

Indexed as

CandidaCandida albicansCandida glabrataCandida tropicalisDNA Barcoding, TaxonomicHumansReal-Time Polymerase Chain ReactionReproducibility of ResultsTubulinTubulinCandidaHigh resolution meltingSimplex PCRSpecies level identificationTm calling

Identifiers

PMID30103686
PMCPMC6090785
OpenAlexW2887966358

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.