Evidence map›Paper›PMID 30102332›Full record

ArticleNucleic acids research2018

Schizosaccharomyces pombe Pol II transcription elongation factor ELL functions as part of a rudimentary super elongation complex.

Sneha Gopalan, Dana M Gibbon, Charles As Banks, Ying Zhang, Laurence A Florens, Michael P Washburn, Preeti Dabas, Nimisha Sharma, Christopher W Seidel, Ronald C Conaway and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  4. Genetics · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Sneha GopalanStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Dana M GibbonStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Charles As BanksStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Ying ZhangStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Laurence A FlorensStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Michael P WashburnStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Preeti DabasUniversity School of Biotechnology, G.G.S.Indraprastha University, New Delhi 110078, India.
Nimisha SharmaUniversity School of Biotechnology, G.G.S.Indraprastha University, New Delhi 110078, India.
Christopher W SeidelStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Ronald C ConawayStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Joan W ConawayStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Stowers Institute for Medical Research · USGuru Gobind Singh Indraprastha University · INUniversity of Kansas Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ELL family transcription factors activate the overall rate of RNA polymerase II (Pol II) transcription elongation by binding directly to Pol II and suppressing its tendency to pause. In metazoa, ELL regulates Pol II transcription elongation as part of a large multisubunit complex referred to as the Super Elongation Complex (SEC), which includes P-TEFb and EAF, AF9 or ENL, and an AFF family protein. Although orthologs of ELL and EAF have been identified in lower eukaryotes including Schizosaccharomyces pombe, it has been unclear whether SEC-like complexes function in lower eukaryotes. In this report, we describe isolation from S. pombe of an ELL-containing complex with features of a rudimentary SEC. This complex includes S. pombe Ell1, Eaf1, and a previously uncharacterized protein we designate Ell1 binding protein 1 (Ebp1), which is distantly related to metazoan AFF family members. Like the metazoan SEC, this S. pombe ELL complex appears to function broadly in Pol II transcription. Interestingly, it appears to have a particularly important role in regulating genes involved in cell separation.

Indexed as

Positive Transcriptional Elongation Factor BRNA Polymerase IISchizosaccharomycesSchizosaccharomyces pombe ProteinsTranscriptional Elongation FactorsTranscription FactorsTranscription, Geneticeaf1 protein, S pombeell1 protein, S pombePositive Transcriptional Elongation Factor BRNA Polymerase IISchizosaccharomyces pombe ProteinsTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID30102332
PMCPMC6212713
OpenAlexW2887379018

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.